Pairwise Alignments

Query, 648 a.a., Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 230 a.a., putative macrolide efflux ABC transporter, ATP-binding protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  202 bits (515), Expect = 1e-56
 Identities = 108/230 (46%), Positives = 154/230 (66%), Gaps = 4/230 (1%)

Query: 4   LLELCNVSRSYPSGEEQVAVLKDISLQIHAGEMVAIVGVSGSGKSTLMNILGCLDKPTSG 63
           ++ L  +++S+  G+ +V  L+ + + I   E VAI+G SGSGKSTLMNI+GCLD+PTSG
Sbjct: 1   MISLQALTKSFRMGDAEVQALRGVDIHIRQNEFVAIMGPSGSGKSTLMNIIGCLDRPTSG 60

Query: 64  TYRVAGRDVSTLDPDALAQLRREHFGFIFQRYHLLSHLTAAQNVEIPAVYAGIERKKRQA 123
            Y + G  V  L  DAL+ +R    GF+FQ +HLL  L+A  NV +P  ++   R  RQ 
Sbjct: 61  NYLLNGSAVGGLSDDALSAVRNREIGFVFQSFHLLPRLSALDNVLLPLRFSETPRGDRQ- 119

Query: 124 RARELLLRLGLSDRVDYPPSQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEV 183
            A ELL R+GL  R+D+ P+QLSGGQ+QRV+IARAL+N   ++LADEPTGALDS +  E+
Sbjct: 120 HAIELLERVGLGQRLDHRPNQLSGGQRQRVAIARALVNRPTLLLADEPTGALDSKTSVEI 179

Query: 184 MAILRQLRDRGHTVIIVTHDPLIAAQAERIIEIHDGKIVHNPPAQEKKRE 233
           MA+  +L   G T+++VTH+  +A  A RII + DG +  +   ++K RE
Sbjct: 180 MALFDELHLSGQTIVLVTHEEEVAECAGRIIRMRDGVVQQD---KQKPRE 226