Pairwise Alignments

Query, 447 a.a., FIG065221: Holliday junction DNA helicase from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 443 a.a., replication-associated recombination protein A from Rhodopseudomonas palustris CGA009

 Score =  372 bits (955), Expect = e-107
 Identities = 199/423 (47%), Positives = 273/423 (64%), Gaps = 10/423 (2%)

Query: 14  QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73
           +PL  R+RP +LA  +GQ H+L     L R ++   L S++ WGPPGTGKTT+A ++A  
Sbjct: 24  RPLPDRLRPRSLADVVGQDHILGPDGALTRMLQTRTLGSLVFWGPPGTGKTTVARLLADA 83

Query: 74  ASADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133
                E+ISAV SGV ++++  + AR  R  G+ T+LFVDEVHRFNK+QQD+FLP +EDG
Sbjct: 84  TELQFEQISAVFSGVADLKKVFDAARARREMGKGTLLFVDEVHRFNKAQQDSFLPVMEDG 143

Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLTTDDIEQVLDQAMQDKTRGYGDQDIVLP 193
           T+  +GATTENPSFELN+ALLSRARV + K L    IEQ+  +A   + R      + L 
Sbjct: 144 TVVMVGATTENPSFELNAALLSRARVLIFKPLDAAAIEQLFSKAEAAEGR-----KLPLD 198

Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEADDSGKRVLLPALLTEIAGERSARFDNKGD 253
           DE R  +A + +GD R +L   E +   A   +    V   A L EI   R+  +D   D
Sbjct: 199 DEARAVLARMADGDGRASLTLAEEVWRSAREGE----VFNAAQLQEILQRRAPIYDKSAD 254

Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313
             Y+LISALHKSVRGS PDAALY+  R++ AG DPL++ARR + +A EDVG ADP+A+ +
Sbjct: 255 GHYNLISALHKSVRGSDPDAALYYLCRMLDAGEDPLFLARRVVRMAVEDVGMADPQALVI 314

Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373
           A AA D +  +G  EGE AIAQA++Y+A APKSNA Y+A+K+A+  A++      P H+ 
Sbjct: 315 ANAAKDAYDFLGSPEGELAIAQAVIYVATAPKSNAAYSAYKSAMRLAKQAGSLLPPKHIL 374

Query: 374 NAPTKLMKEMGYGQEYRYAHDEPNAYAAGEVYFPPEIAQTRYYHPTNRGLEGKIGEKLAW 433
           NAPT LMK  GYG  Y+Y HD P  + +G+ YFP  + +  +Y P +RG E  I ++L +
Sbjct: 375 NAPTGLMKNEGYGSGYQYDHDTPEGF-SGQDYFPETLGRQTFYDPPDRGFERDIRKRLDY 433

Query: 434 LAE 436
            A+
Sbjct: 434 WAK 436