Pairwise Alignments

Query, 573 a.a., Transport ATP-binding protein CydC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 599 a.a., lipid A export ATP-binding/permease protein MsbA from Phaeobacter inhibens DSM 17395

 Score =  210 bits (535), Expect = 1e-58
 Identities = 166/591 (28%), Positives = 280/591 (47%), Gaps = 54/591 (9%)

Query: 1   MRALLPYLTLYKRHKWMLTLGIALAI---LTLLASIGLLT----------LSGWFLSASA 47
           + AL P++  Y+    M TL + L     LTL  ++  +           L+ +F +A  
Sbjct: 23  LSALWPFMRPYRVLMAMATLALVLTAGLSLTLPLAVRRVVDNFRISEAALLNQYFAAALV 82

Query: 48  IAGFAGIYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSKLLPLS 107
           IA    +          G+R A +TR   R             V+  +R   F +++ +S
Sbjct: 83  IAALLAV--------GTGLRYALVTRLGER-------------VVADIRKAVFDRVIGMS 121

Query: 108 PASLARYQQGELLNRIVADVDTLDHLYLRVISPLVGAFVVIMIVTLGLSVLDVTLAITLG 167
           PA   +   GE+L+RI  D   +      V+   V   +  M++ +G  VL   + +T  
Sbjct: 122 PAFFEQIMTGEVLSRITTDTTLIQS----VLGSSVSIALRNMLIFIGGLVL---MLLTSA 174

Query: 168 GIMLLTLFIMPPVFYRAGKNTGQNLTHLRGQYRQQLTSWLQGQAEL-----TIFGASKRY 222
            +  L L I+P V        G+ L  +  + +  + +      E      T+   +   
Sbjct: 175 KLTSLVLLIVPAVIVPI-LVLGRRLRKISRENQDWIAASSGNAGEALGAVQTVQAYTHEV 233

Query: 223 RAQMEATELQW--HEAQRRQSELTALSQALMLLIGALAVMLMLWMASGGVGGNTQPGALI 280
            ++ E + L     +   R+ +  A    +++ +    V+ +LWM +  V         +
Sbjct: 234 ASRSEFSRLTETAFDVSMRRIQTRAFLTVIVIFLVFSGVVGVLWMGANDVRAGIMSEGTL 293

Query: 281 ALFVFCALAAFEALAPVTGAFQHLGQVIASALRITELTEQKPEVTFPQAETP--APEKVT 338
             FV  A+    ++A ++  +  L +   +  R+ EL     +V  P A     AP +  
Sbjct: 294 VQFVIYAVLVAGSVAALSEIWSELQRAAGATERLVELLTAVDQVQDPYAPRALAAPVRGE 353

Query: 339 LTLRDVSFRYPDQP-INALNALSLQANPGEHVAILGRTGCGKSTLLQLLTRAWDPQQGEI 397
           +   DVSFRYP +P I AL  +SL   PGE VA +G +G GK+T++Q++ R +DP  G +
Sbjct: 354 IRFDDVSFRYPARPQIPALVDVSLTVQPGETVAFVGPSGAGKTTIIQMIQRFYDPTSGAV 413

Query: 398 LLNDLPLSSLSESALRRTISVVPQRVHLFSATLRDNLLLAAPNASDEALSDMLRRVGLEN 457
            L+  PL  L     R+ I++VPQ   +F+ + RDN+    P ASD  +    R     +
Sbjct: 414 CLDGRPLRDLQRDDFRQHIALVPQDPVIFALSARDNIRFGRPGASDAEVEAAARAAAAHD 473

Query: 458 LLE--DSGLNSWLGEGGRLLSGGELRRLAIARALLHDAPLMLLDEPTEGLDATTESEMLE 515
            +     G +S +GE G +LSGG+ +R+AIARA+L DAP++LLDE T  LDA +E  +  
Sbjct: 474 FISALPEGYDSQVGERGVMLSGGQKQRIAIARAILRDAPVLLLDEATSALDAESERLVQA 533

Query: 516 LLADVMREKTVLMVTHRLRGLARFDQIIVMDDGHIIERGTHAELLAGQGRY 566
            + ++ + +T L+V HRL  + + D+I+VM++G II  GTH +L+A  G Y
Sbjct: 534 AVDELSQGRTTLIVAHRLATVKKADRIVVMEEGRIIATGTHDQLVAEDGLY 584