Pairwise Alignments

Query, 573 a.a., Transport ATP-binding protein CydC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 583 a.a., ABC transporter, ATP-binding protein CydC (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  493 bits (1268), Expect = e-143
 Identities = 260/584 (44%), Positives = 385/584 (65%), Gaps = 13/584 (2%)

Query: 1   MRALLPYLTLYKRHKW-MLTLGIALAILTLLASIGLLTLSGWFLSASAIAGFAGIYS--F 57
           M+ L+P++ L+  H+W M+ +G+ L + TL+A IGLL+LSGWFLSA+A+AG   + +  F
Sbjct: 1   MKVLIPFIRLFS-HQWVMMAVGLILTLTTLMAGIGLLSLSGWFLSATAVAGLTLVSAQVF 59

Query: 58  NYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSKLLPLSPASLARYQQG 117
           N+  PA GVR  +I RTA RY ERL +H+ATF++L  LR++ + KL PLS  +L   ++ 
Sbjct: 60  NFFTPAGGVRFLSIARTASRYGERLATHEATFKLLTELRVWAWRKLFPLSAKNLQGLRRA 119

Query: 118 ELLNRIVADVDTLDHLYLRVISPLVGAFVVIMIVTLGLSVLDVTLAITLGGIMLLTLFIM 177
           ++LNR+VAD+DTLDHLYLR+++P+  + ++  ++ L L+  D  LA++L   ++L   ++
Sbjct: 120 DMLNRLVADIDTLDHLYLRLLTPMAASLLMTGLLYLFLAWFDAKLALSLCLFLILVWLLL 179

Query: 178 PPVFYRAGKNTGQNLTHLRGQYRQQLTSWLQGQAELTIFGASKRYRAQMEATELQWHEAQ 237
           P +FYR G    +N+   + QYR QL   LQGQAEL++FGA+ RYR +++  E     +Q
Sbjct: 180 PLLFYRLGHAPSRNMLETKRQYRVQLLDILQGQAELSLFGANARYRQKLDDAEQALFASQ 239

Query: 238 RRQSELTALSQALMLLIGALAVMLMLWMASGGVGGNTQPGALIALFVFCALAAFEALAPV 297
              + +TALSQA++++    A+++ML++A+ GVG    PG + AL VF  +A  E + P+
Sbjct: 240 TAMANITALSQAMLIIATGSALIMMLFLAANGVGDAVPPGPMFALMVFATMACVEMMMPI 299

Query: 298 TGAFQHLGQVIASALRITELTEQKPEVTFPQAETPAPEKVTLTLRDVSFRYPDQPINALN 357
            GAFQHL   + +A+RI E+TEQ+ ++ F            L + D+ F Y +   + L 
Sbjct: 300 AGAFQHLSGCVLAAMRINEITEQESDIRFSTDTDLKAISGGLQIHDIHFGYLENQ-HVLQ 358

Query: 358 ALSLQANPGEHVAILGRTGCGKSTLLQLLTRAWDPQQGEILLNDLPLSSLSESALRRTIS 417
            LSL+  PG+ VA+LG TGCGKS+LL L+TR W  Q G+I L+   LS  SE ALR  ++
Sbjct: 359 GLSLEIKPGQKVALLGSTGCGKSSLLSLITRDWQAQSGQIYLDGHLLSDYSECALRSAMT 418

Query: 418 VVPQRVHLFSATLRDNLLLAAP-------NASDEALSDMLRRVGLENLLE-DSGLNSWLG 469
           VV QR++L++ TLR+NL +A P        A+D    D+L++VGL +LL+ D  L+ W+G
Sbjct: 419 VVSQRIYLYAGTLRENLAIALPVPEGQKRTANDARFIDVLQQVGLGDLLKGDKPLDMWIG 478

Query: 470 EGGRLLSGGELRRLAIARALLHDAPLMLLDEPTEGLDATTESEMLELLADVMREKTVLMV 529
           EGGR LSGGE RR+ +ARALL DAPL+LLDEPTEGLD  TE E+L LL +  ++KT+LM+
Sbjct: 479 EGGRQLSGGEQRRIGVARALLRDAPLLLLDEPTEGLDKRTEREILSLLFEFAKDKTLLMI 538

Query: 530 THRLRGLARFDQIIVMDDGHIIERGTHAELLAGQGRYYQFKQRL 573
           +HRL  +A+ DQI +M +G I+  G H  LL     Y    +RL
Sbjct: 539 SHRLTAMAKMDQIHLMAEGKIMASGNHQSLLKECAAYQALYRRL 582