Pairwise Alignments

Query, 348 a.a., Putative transport protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 344 a.a., Putative ammonia monooxygenase from Pseudomonas syringae pv. syringae B728a

 Score = 99.0 bits (245), Expect = 2e-25
 Identities = 89/337 (26%), Positives = 154/337 (45%), Gaps = 12/337 (3%)

Query: 5   QWFLLFLLSLLISLIFLYLHLPAAMLLGPMIAGIVLSLRG--STLQLPRGIFLAAQAILG 62
           QW+   L+ LL   +   +  P   ++G ++A I++         Q+P G     Q I+G
Sbjct: 8   QWWATPLIGLLGGYLASQVGWPLPWMVGSLLAIILVRCLTPWQLAQIPGGR-KCGQLIIG 66

Query: 63  CMIAQNLTGSILTTLALYWPVVLLVLLVTLLSSAVVGWLLVRYSSLPGNTGAWGSSPGGA 122
             I  + T  ++  +  ++ ++ +  LVT LS  V  WL++R       T  + S PGG+
Sbjct: 67  IGIGLHFTPVVIEQVLAHFGLIFIGALVTSLSCLVGVWLMLRTGE-DRPTAFFSSMPGGS 125

Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRLILGDSAAAVSQQVIWFPPLSGN 182
             MV +    GA +  VA  Q LRVL V      + + +LGD A A+   V+ +  L+  
Sbjct: 126 GEMVNLGARNGATLSSVAAAQSLRVLAVVLCVPAIFKYLLGDGAPALHASVVDWRWLA-- 183

Query: 183 VLTTLLLAIVAGIAG--RLMRIPSGTMLLPMLAGALLHSQGIIEIELPEWLLAVAYMAIG 240
               +LL + A +A   + ++ P+  +  P+L  A++     ++I LP     +  + IG
Sbjct: 184 ----VLLPLGAALAWLWQHLKQPNPWLFGPLLLSAVVSVVWDLKIGLPNGASQLGQLLIG 239

Query: 241 WRIGLGFDRQVFFMALRPLPQILLSIFALMAICAAMAWGMAYYMQIDFMTAYLATSPGGL 300
             +G  F+R+ F  A   L + LL     M I A  A  ++    +D  +  L   PGG+
Sbjct: 240 SGLGCHFNREFFRRAPSFLARTLLGTALTMLIAALAALALSALTHLDLRSLTLGMMPGGI 299

Query: 301 DTVAAIAAGSSADMALIMAMQTLRLFSILLTGPAVAR 337
             ++  A      + L+ AMQ +RL  +L     + R
Sbjct: 300 AEMSLTAEVLQLSVPLVTAMQVMRLLFVLFLAEPLYR 336



 Score = 45.4 bits (106), Expect = 2e-09
 Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 12/139 (8%)

Query: 209 LPMLAGALLHSQGIIEIE-LPEWLLA-------VAYMAIGWRIGLGFDRQVFFMALRPLP 260
           LP + G+LL    II +  L  W LA          + IG  IGL F   V    L    
Sbjct: 30  LPWMVGSLL---AIILVRCLTPWQLAQIPGGRKCGQLIIGIGIGLHFTPVVIEQVLAHFG 86

Query: 261 QILLSIFALMAICAAMAWGMAYYMQIDFMTAYLATSPGGLDTVAAIAAGSSADMALIMAM 320
            I +        C    W M    + D  TA+ ++ PGG   +  + A + A ++ + A 
Sbjct: 87  LIFIGALVTSLSCLVGVWLMLRTGE-DRPTAFFSSMPGGSGEMVNLGARNGATLSSVAAA 145

Query: 321 QTLRLFSILLTGPAVARFI 339
           Q+LR+ +++L  PA+ +++
Sbjct: 146 QSLRVLAVVLCVPAIFKYL 164