Pairwise Alignments

Query, 250 a.a., Phosphatase NagD predicted to act in N-acetylglucosamine utilization subsystem from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 248 a.a., nagD protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  382 bits (981), Expect = e-111
 Identities = 178/248 (71%), Positives = 212/248 (85%)

Query: 3   IKNVICDIDGVLMHDNVAVPGAAEFLTGILEKGLPLVLLTNYPSQTGQDLANRFATAGVN 62
           +KN+ICDIDGVL+HDN  +PG+ +F+  ILE+G PLV+LTNYP QTG+DL NR + AG++
Sbjct: 1   MKNIICDIDGVLLHDNKLIPGSDKFIQRILEQGNPLVILTNYPVQTGKDLQNRLSAAGID 60

Query: 63  VPDSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSY 122
           VP+  FYTSAMATADFL+ QEG KA+V+GEGAL HELYKAGFTITD+NPDFVIVGETRSY
Sbjct: 61  VPEECFYTSAMATADFLKHQEGSKAFVIGEGALTHELYKAGFTITDINPDFVIVGETRSY 120

Query: 123 NWDMMHKAAFFVANGARFIATNPDTHGRGFYPACGALCAGIEKISGRKPFYVGKPSPWII 182
           NWDM+HKAA FVA GARFIATNPDTHG  + PACGALC+ IE+I+G+KPFYVGKPS WII
Sbjct: 121 NWDMIHKAAGFVARGARFIATNPDTHGPAYSPACGALCSPIERITGKKPFYVGKPSSWII 180

Query: 183 RAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTINDIDSMPFRPSWIYP 242
           R+ALN +  HSE TVI+GDN+RTDILAGFQAGLETILV SGVS + DID  PFRP+ ++ 
Sbjct: 181 RSALNHIDGHSENTVIIGDNMRTDILAGFQAGLETILVTSGVSKLEDIDKEPFRPNHVFA 240

Query: 243 SVAEIDVI 250
              +IDV+
Sbjct: 241 CAGDIDVV 248