Pairwise Alignments

Query, 390 a.a., Protein AraJ precursor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 388 a.a., arabinose transporter permease from Pseudomonas fluorescens FW300-N2E3

 Score =  232 bits (591), Expect = 2e-65
 Identities = 130/380 (34%), Positives = 213/380 (56%), Gaps = 2/380 (0%)

Query: 8   LALGTFGLGMAEFGIMGVLTELARDVGITIPAAGHMISFYAFGVVLGAPVMALFSSRFSL 67
           LAL  F +G  EF IMG+L ++A D+G++IP AG +++ YA GV +GAP MAL ++R   
Sbjct: 8   LALSAFAIGTTEFVIMGLLPDVAADLGVSIPGAGWLVTGYALGVAIGAPFMALATARLPR 67

Query: 68  KHILLFLVMLCVMGNAIFTFSSSYLMLAVGRLVSGFPHGAFFGVGAIVLSKIIRPGKVTA 127
           K  L+ L+ + ++GN +   +S Y +L   R+V+   HGAFFG+G++V + ++   K  +
Sbjct: 68  KAALVALMGIFIVGNLLCALASDYQVLMFARVVTALCHGAFFGIGSVVAAGLVPANKRAS 127

Query: 128 AVAGMVSGMTVANLVGIPFGTYLSQEFSWRYTFLLIAVFNIAVLTAIFFWVPDIRDKAQG 187
           AVA M +G+T+AN++G+P GT L QE  WR TF  + V  +  L  +  ++P  RD+ + 
Sbjct: 128 AVALMFTGLTLANVLGVPLGTALGQEAGWRSTFWAVTVIGVIALIGLIRFLPAKRDEEKL 187

Query: 188 SLREQFHFLRSPSPWLIFAATMFGNAGVFAWFSYIKPFMMYISGFSETSMTFIMMLVGLG 247
            +R +   L+    WL  + T    A VF  F+Y+ P +  ++G S   +T+ +ML+GLG
Sbjct: 188 DMRAELSALKGAGIWLSLSMTALFAASVFTLFTYVAPLLGEVTGVSPRGVTWTLMLIGLG 247

Query: 248 MVLGNLLSGKLSGRYTPLRIAVVTDLVIVLSLMALFFFSGYKTTSLTFAFICCAGLFALS 307
           + +GN++ GKL+ +     +  V   + V+S +  +       T +T  F+     FA  
Sbjct: 248 LTVGNIIGGKLADKGMAATLIGVFISMAVVSTVLTWTSVAVIPTEITL-FLWATACFAAV 306

Query: 308 APLQILLLQNAKGGELLGAAGGQIAFNLGSAIGAWCGGLMLTLGFAYHYVALPAALLSFS 367
             LQ+ ++   K    L +     AFN+G+A+GAW GG ++  GF    V L AA L+  
Sbjct: 307 PALQVNVVTFGKAAPNLVSTLNIGAFNVGNALGAWVGGSVIAHGFGLTSVPLAAAALAIL 366

Query: 368 AMSSLLVYGRLKHKQPSVTP 387
           A+   L+  R +   P + P
Sbjct: 367 ALLVTLITFR-QSGNPELAP 385