Pairwise Alignments

Query, 390 a.a., Protein AraJ precursor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 389 a.a., arabinose transporter permease from Pseudomonas fluorescens FW300-N2E3

 Score =  228 bits (580), Expect = 3e-64
 Identities = 126/392 (32%), Positives = 217/392 (55%), Gaps = 5/392 (1%)

Query: 1   MKKVIFSLALGTFGLGMAEFGIMGVLTELARDVGITIPAAGHMISFYAFGVVLGAPVMAL 60
           M   +F+LA+  FG+G  EF IMG+L ++ARD+ ++IP AG +I+ YA GVV GAP++A+
Sbjct: 1   MPLALFALAVAAFGIGTTEFVIMGLLPDVARDLAVSIPEAGLLITGYALGVVFGAPILAV 60

Query: 61  FSSRFSLKHILLFLVMLCVMGNAIFTFSSSYLMLAVGRLVSGFPHGAFFGVGAIVLSKII 120
            ++    K  LL + ++ ++GN +   + +Y  L   R+++   HGAFFG+G++V + ++
Sbjct: 61  GTANMPRKATLLGMTLMFILGNMLCALAPNYATLMAARVITALCHGAFFGIGSVVAAGLV 120

Query: 121 RPGKVTAAVAGMVSGMTVANLVGIPFGTYLSQEFSWRYTFLLIAVFNIAVLTAIFFWVPD 180
            P K   A+A M +G+T+AN++G+P GT L Q   WR TF  ++V  +    A + W+P 
Sbjct: 121 APNKRAQAIAMMFTGLTLANVLGVPLGTALGQYAGWRSTFWAVSVIGVIAAIAQWVWLPK 180

Query: 181 IRDKAQGSLREQFHFLRSPSPWLIFAATMFGNAGVFAWFSYIKPFMMYISGFSETSMTFI 240
                + +L  +F  L   +  L    ++  +  +F+ F+YI P +  I+G S   +T +
Sbjct: 181 EIAMDKANLASEFKVLGKTNVLLALGMSVLASTSLFSVFTYIAPILQDITGVSPHGVTIM 240

Query: 241 MMLVGLGMVLGNLLSGKLS-GRYTPLRIAVVTDLVIVLSLMALFFFSGYKTTSLTFAFIC 299
           ++L G+G+  G++L G+L+  R  P  + +   +V+VL   A F  + +         + 
Sbjct: 241 LLLFGVGLTAGSMLGGRLADSRLLPSLVGMALAVVLVL---AAFSQTSHSVIPAAITLVL 297

Query: 300 CAGL-FALSAPLQILLLQNAKGGELLGAAGGQIAFNLGSAIGAWCGGLMLTLGFAYHYVA 358
                FAL   LQ+L++  A     LG+   Q AFNLG+A GAW GGL++  G     + 
Sbjct: 298 WGVFAFALCPILQLLIIDQAHEAPNLGSTLNQSAFNLGNAAGAWIGGLVVASGANLADLP 357

Query: 359 LPAALLSFSAMSSLLVYGRLKHKQPSVTPVAG 390
              AL+S   + + L +  L+ ++ +   V G
Sbjct: 358 WTGALVSGLTVLTALFFIYLQRREAATANVPG 389