Pairwise Alignments

Query, 390 a.a., Protein AraJ precursor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 393 a.a., Arabinose efflux permease from Sphingomonas koreensis DSMZ 15582

 Score =  211 bits (536), Expect = 4e-59
 Identities = 119/373 (31%), Positives = 198/373 (53%), Gaps = 1/373 (0%)

Query: 5   IFSLALGTFGLGMAEFGIMGVLTELARDVGITIPAAGHMISFYAFGVVLGAPVMALFSSR 64
           + +LA G FG+G+ EF  MG+L  +A D+G++IPAAG ++S YA GV++GAP+M L + R
Sbjct: 7   LLALAAGAFGIGVTEFAPMGLLPVIANDLGVSIPAAGLLVSAYALGVLIGAPLMTLTTGR 66

Query: 65  FSLKHILLFLVMLCVMGNAIFTFSSSYLMLAVGRLVSGFPHGAFFGVGAIVLSKIIRPGK 124
              + +L+ L  +  +GN +   +  Y  L   R+++   HGAFFGVG+IV + ++ P +
Sbjct: 67  VPRRTLLIGLAAIFTLGNLLSAVADGYWTLLAARVLTSLNHGAFFGVGSIVAASVVAPDR 126

Query: 125 VTAAVAGMVSGMTVANLVGIPFGTYLSQEFSWRYTFLLIAVFNIAVLTAIFFWVPDIRDK 184
              AVA M  G+TVA +VG+P  T+  +   WR +F  IA   +  + A+ F +P +   
Sbjct: 127 KAGAVAAMFMGLTVAIIVGVPLSTWAGEHLGWRASFWAIAGLGVVTMAALRFTLPAMPAP 186

Query: 185 AQGSLREQFHFLRSPSPWLIFAATMFGNAGVFAWFSYIKPFMMYISGFSETSMTFIMMLV 244
             G++ ++   L           T+ G++ +F  F+YI P +   +  S   +T ++++ 
Sbjct: 187 EGGNVADELRVLARKPVLAALGLTVIGSSAMFTVFTYITPILQTQTRASLAFVTAMLVVY 246

Query: 245 GLGMVLGNLLSGKLSGRYTPLRIAVVTDLVIVLSLMALFFFSGYKTTSLTFAFICCAGLF 304
           G+G+ +GN L GK + +    R  +VT   +   L+A      +        F+     F
Sbjct: 247 GVGLTVGNWLGGKFADKSVD-RTLIVTLASLSAVLVAFAALMPFHAPVTVLVFLWGVASF 305

Query: 305 ALSAPLQILLLQNAKGGELLGAAGGQIAFNLGSAIGAWCGGLMLTLGFAYHYVALPAALL 364
           AL  PLQ+ ++  A     L ++    AFNLG+AIGA  GG ++  G  Y  V+L  A  
Sbjct: 306 ALVPPLQVRVMTAAADAPNLASSVNIGAFNLGNAIGAALGGAVIAGGLGYPAVSLAGAAT 365

Query: 365 SFSAMSSLLVYGR 377
           S   +  +L+  R
Sbjct: 366 SAIGLIMVLLARR 378