Pairwise Alignments

Query, 336 a.a., putative Cytochrome bd2, subunit II from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 330 a.a., cytochrome BD ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

 Score =  214 bits (546), Expect = 2e-60
 Identities = 120/329 (36%), Positives = 179/329 (54%), Gaps = 15/329 (4%)

Query: 5   LPVIWFAIIVFATLMYIVMDGFDLGVGILFPFIRDKHDRDVMVNSVAPVWDGNETWLVLG 64
           LP I+  ++ F   MY V+DG+DLGVGIL P   D   RD M+ S+ P WD NETWLVL 
Sbjct: 5   LPEIYLLLLGFTVFMYAVLDGYDLGVGILLPR-NDVAQRDRMIASIGPFWDANETWLVLA 63

Query: 65  GAGLFGAFPLAYAVITDALTIPLVVMLLGLIFRGVAFEFRFKATESHRAFWDKSFIVGSI 124
              L  AFP A+++I   L +P  +ML+ LI RGVAF+FR KA   H+  WD  F +GS+
Sbjct: 64  VGILLIAFPTAHSLIFTELYLPTALMLIALIMRGVAFDFRAKAKADHKDHWDLCFKIGSL 123

Query: 125 LATFAQGVVVGAVVSGFQVEGRTFSGSQLDWLTPFNLFCGVGLVVTYALLGATWLIMKSE 184
           LA   QG ++G  V GF+     ++         F +   + +   Y  +G  WL++K+E
Sbjct: 124 LAALTQGYMIGRYVVGFESAPEAYA---------FAVLSALCVAAAYVYIGGAWLVLKTE 174

Query: 185 DPLHSRMCALSRPLLIVLLLVMGGVSVWTPLTHDDIAERWFTLPNLYYFLPVPVLVLAFS 244
             L  R    SR    +  L +  VS+  P  +  +AERWF+ P +    PVP++V A  
Sbjct: 175 GELQVRAARWSRKAGWLAALGVLSVSLVNPWVNSAVAERWFSFPEVILLAPVPIIVFATI 234

Query: 245 VWLWRSVKK-----PESHARPFILTLGLIFLGFSGLGISIWPNIIPPDISLYAAAAPPQS 299
           + + R +K+           PF   + +  L F GL  S +P I+P  ++   AA+ P++
Sbjct: 235 LVVDRYLKRVPTVNDAGVQWPFFGVVLIFGLSFLGLAYSFFPEIVPGIMTAQQAASSPET 294

Query: 300 QSFMLVGALIIIPIILAYTFWSYYVFRGK 328
              + +G +I++P IL YTF+ Y +F+GK
Sbjct: 295 LMVVGIGVVIVMPTILLYTFFVYRIFKGK 323