Pairwise Alignments

Query, 326 a.a., Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 325 a.a., pseudouridine synthase, RluA family from Marinobacter adhaerens HP15

 Score =  349 bits (896), Expect = e-101
 Identities = 169/311 (54%), Positives = 231/311 (74%), Gaps = 1/311 (0%)

Query: 3   QRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILNQRVLVNGQLCDKPKEKVLGG 62
           +R+     V      +RLDQA AE+ P++SRSR++ WI +  + VNG++  KP++KV+  
Sbjct: 5   KRILANFVVPPELSDRRLDQAAAELMPEHSRSRLQSWIKSGALTVNGEV-RKPRDKVMLD 63

Query: 63  ERVAIDAEIDEEIRFEAQDIPLDIVYEDDDILVINKPRDLVVHPGAGNPDGTVLNALLHY 122
           +R+A+DAE + ++ ++A++I LDIVYED+ +LVINKP  LVVHP AG+ DGT++NALL+Y
Sbjct: 64  DRLALDAEPEAQVSWQAEEISLDIVYEDEHLLVINKPAGLVVHPAAGHADGTLVNALLNY 123

Query: 123 YPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQLREITREYEAVAIGHMTAG 182
            P + ++PRAGIVHRLDKDT+G+MVVA+++ A T LV+ LQ R + REYEAV +G +T G
Sbjct: 124 APEVENLPRAGIVHRLDKDTSGIMVVARSLIAHTSLVDQLQTRTMGREYEAVVVGTLTGG 183

Query: 183 GTVNEPISRHPTKRTHMSVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHMAH 242
            TV+ PI RHP +R  M+V   GKPAVTHYR++E F  HT +R +LE+GRTHQIRVHMAH
Sbjct: 184 ATVDAPIGRHPRERKKMAVVASGKPAVTHYRLVERFAAHTHVRCKLESGRTHQIRVHMAH 243

Query: 243 ITHPLVGDQVYGGRPRPPKGASEEFISTLRKFDRQALHATMLRLYHPVSGIEMEWHAPIP 302
           + HPLVGD +YGGR R PKG ++E    L  F+RQALHA  L L HP +G  + W  P+P
Sbjct: 244 VKHPLVGDPLYGGRLRLPKGTTDELREALSTFNRQALHARQLTLEHPETGEILTWEVPLP 303

Query: 303 QDMVDLIDAMR 313
           +DMV LI+A+R
Sbjct: 304 EDMVALIEALR 314