Pairwise Alignments

Query, 324 a.a., Protein with similarity to RtcB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 465 a.a., protein rtcB (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 92.4 bits (228), Expect = 2e-23
 Identities = 93/305 (30%), Positives = 132/305 (43%), Gaps = 32/305 (10%)

Query: 21  WIEDSAIQQLYTTAKLTGMKRVIGMPDLHPGRGYPIGAAFFSRGRFYPALVGNDIGCGMA 80
           +IE  A QQ+    +L        MPD H G G PIG    +     P  VG DIGC M+
Sbjct: 93  FIETLAKQQMNLAMRLPVTVGGALMPDAHAGYGLPIGGVLATDNAVIPYAVGVDIGCRMS 152

Query: 81  LWQTDILGR--KYNADKLEKRLASLTDVA-DAQWLEENVPAAMQHHSWRSA--------- 128
           L   D      K  + ++++ L   T    D     E     +    +R           
Sbjct: 153 LTVFDAKADFLKRYSYQIKEALKDFTHFGMDGGLGFEQEHEVLDREEFRLTPLLKDLQGK 212

Query: 129 ----LGSIGGGNHFAELQQVDRIVDADSFALSGLQKAQLLLLVHSGSRGLGQTILRRHV- 183
               LGS GGGNHF E  ++   + AD+  L+  + + + LL HSGSRGLG  I + +  
Sbjct: 213 AVRQLGSSGGGNHFVEFGEI--ALQADN-VLNLPEGSYVALLSHSGSRGLGAAIAKHYSL 269

Query: 184 ----------EAFSHNGLPEDSDDARRYLAEHDDALAFARSNRALIARRILQQLRAEGEP 233
                     EA     L  DS++ + Y    + A  +AR+    I   + + L  +   
Sbjct: 270 LAREVCKLPREAQHFAWLSLDSEEGQEYWMSMNLAGDYARACHERIHLNLSKALGLKPVA 329

Query: 234 RLDVAHNFVEPCTVA-GEAGWLHRKGATPDGQGLV-IIPGSRGDYSWLVKPVVSEESLFS 291
            ++  HNF     +A G    +HRKGATP  +G   +IPGS     +LV     EESL S
Sbjct: 330 NVNNHHNFAWKEEIAPGRMAIVHRKGATPAQKGQAGLIPGSMATAGYLVCGKGVEESLCS 389

Query: 292 LAHGA 296
            +HGA
Sbjct: 390 ASHGA 394