Pairwise Alignments

Query, 303 a.a., Putative inner membrane protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 346 a.a., ABC transporter from Azospirillum brasilense Sp245

 Score =  187 bits (475), Expect = 3e-52
 Identities = 132/340 (38%), Positives = 180/340 (52%), Gaps = 51/340 (15%)

Query: 4   SSLLTLLDDIATL-------LDDISVMGKLAAKKTAGVLGDDLSLNAQQVTGVRANRELP 56
           + L+ LLDD+A L       LDD +     A  K AGV+ DD ++  + V G  A+RELP
Sbjct: 3   TGLIALLDDVAGLAKVAAASLDDAAGQAARAGAKAAGVVVDDAAVTPRYVVGFTADRELP 62

Query: 57  VVWSVAKGSLINKVI-LVPLALLISAFIPWAITPLLMLGGAFLCFEGVEKVLHTFEARKH 115
           ++  +A GSL NK+I L+PLAL +S   PWAITPLLMLGG FLC+EG EKV      R H
Sbjct: 63  IIGKIALGSLKNKLIFLLPLALALSLVAPWAITPLLMLGGGFLCYEGAEKVWEAL--RPH 120

Query: 116 KEDPAERQKRLEALAAQNPLAFEKDKVKGAVRTDFILSAEIVAITLGIVA--QAPLLNQV 173
               A +       A Q+   FE++KV  A++TD ILSAEI+AI L  VA   +    Q 
Sbjct: 121 ---AAHQDAEGAGAAGQDAAQFEREKVNSAIKTDLILSAEIMAIVLSTVAAETSSFWMQA 177

Query: 174 LVLAGIALVVTIGVYGLVGIIVKLDDMGYWLAEK------------------------RS 209
            VLA +   +T  VYG V +IVK DD+G  LA+                          +
Sbjct: 178 AVLAVVGAGITGLVYGAVALIVKADDVGLSLAQNGRPAASLLGLRTPSPGAPGGADRALA 237

Query: 210 VLAQGVGKGLLIIAPWLMKALSIVGTLAMFLVGGGIVVH-----GIAPLHHAIEHFAQQQ 264
            + Q +G+GL+   P  +K L++VGT AM  VGGGIV+H     G+  + HAI   A   
Sbjct: 238 PVTQAIGRGLVKGMPVFLKLLALVGTAAMLWVGGGIVIHGLEGFGLTAVGHAIHGAAVAA 297

Query: 265 G-------AFMAHTIPAGLNLVLGFIIGAIVVALVKGVAK 297
           G       A +   + A    V G ++GA+++ LV  VA+
Sbjct: 298 GESVPAAKAAVEWLVGAAGAGVFGLLLGALLIPLVHKVAE 337