Pairwise Alignments

Query, 303 a.a., Putative inner membrane protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 308 a.a., Uncharacterized protein conserved in bacteria from Sphingomonas koreensis DSMZ 15582

 Score =  229 bits (585), Expect = 5e-65
 Identities = 133/304 (43%), Positives = 184/304 (60%), Gaps = 24/304 (7%)

Query: 4   SSLLTLLDDIATL-------LDDISVMGKLAAKKTAGVLGDDLSLNAQQVTGVRANRELP 56
           S L  LLDD+A +       LDD+      A  K  GV+ DD ++  + VTG+  +RELP
Sbjct: 3   SGLAALLDDVAAITKLAAASLDDVGAAAGKAGSKAMGVVVDDAAVTPRYVTGLTPDRELP 62

Query: 57  VVWSVAKGSLINKVILV-PLALLISAFIPWAITPLLMLGGAFLCFEGVEKVLHTFEARKH 115
           ++W +A GSL NK++L+ P ALL+S  +PWAITPLLM+GGAFLCFEG EKV+  F    H
Sbjct: 63  IIWKIAMGSLRNKLLLLLPGALLLSWLVPWAITPLLMIGGAFLCFEGAEKVIEAFGGGGH 122

Query: 116 KEDPAERQKRLEALAAQNPLAFEKDKVKGAVRTDFILSAEIVAITLGIVAQAPLLNQVLV 175
             D           A  +P   E  KV GA+RTD ILSAEI+AI L  VA  PL  + +V
Sbjct: 123 GADEE---------AIGDPAHLEAAKVSGAIRTDLILSAEIMAIALNDVAAKPLWERGVV 173

Query: 176 LAGIALVVTIGVYGLVGIIVKLDDMGYWLAEKRSVLAQGVGKGLLIIAPWLMKALSIVGT 235
           LA + + +T+ VYG+VG+IVK+DD G  LA + + LAQ +G+GL+   P +M+ALSI+GT
Sbjct: 174 LALVGIGITVLVYGVVGLIVKMDDFGLHLARRPAQLAQAIGRGLVKGMPVVMRALSIIGT 233

Query: 236 LAMFLVGGGIVVHGIAPL-----HHAIEHFAQ--QQGAFMAHTIPAGLNLVLGFIIGAIV 288
            AM  VGGGI+VHG A L       AI H A+       +   + A  + ++G  +G ++
Sbjct: 234 AAMIWVGGGILVHGAAQLGWHAPEEAIHHVAEAISHSGVITWIVTATGSGIVGLAVGTVI 293

Query: 289 VALV 292
             ++
Sbjct: 294 AFVI 297