Pairwise Alignments

Query, 1026 a.a., Multidrug transporter MdtC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 1034 a.a., multidrug transporter from Pseudomonas fluorescens FW300-N2E3

 Score =  962 bits (2488), Expect = 0.0
 Identities = 512/1023 (50%), Positives = 697/1023 (68%), Gaps = 6/1023 (0%)

Query: 1    MRFFALFIYRPVATILIAAAITLCGILGFRLLPVAPLPQVDFPVIMVSASLPGASPETMA 60
            M    LFI RPVAT L   AI L G++ ++LLPV+ LPQVD+P I V    PGASP+ M 
Sbjct: 1    MNISRLFILRPVATTLSMLAIVLAGMIAYKLLPVSALPQVDYPTIRVMTLYPGASPDVMT 60

Query: 61   SSVATPLERSLGRIAGVNEMTSSSSLGSTRIILEFNFDRDINGAARDVQAAINAAQSLLP 120
            S+V  PLER  G++ G+ +M S+SS G++ + L F+ D +++ A + VQAAINAA +LLP
Sbjct: 61   SAVTAPLERQFGQMPGLTQMASTSSGGASVLTLRFSLDINMDVAEQQVQAAINAATNLLP 120

Query: 121  GGMPSRPTYRKANPSDAPIMILTLTSESWSQGKLYDFASTQLAQTIAQIDGVGDVDVGGS 180
              +P+ P Y K NP+D P++ L +TS++    KL D   T++AQ IAQI GVG V + G 
Sbjct: 121  KDLPAPPVYNKVNPADTPVLTLAITSKTMLLPKLNDLVDTRMAQKIAQISGVGMVSIAGG 180

Query: 181  SLPAVRVGLNPQALFNQGVSLDEVREAIDSANVRRPQGAIEDSVHRWQIQTNDELKTAAE 240
               AVR+ +NP+AL   G++L +VR  I ++NV +P+G  +       +  ND+L +  +
Sbjct: 181  QRQAVRIKVNPEALAANGLNLSDVRTLIGASNVNQPKGNFDGPTRVSMLDANDQLTSPKD 240

Query: 241  YQPLIIHYNNGAAVRLGDVASVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDGI 300
            Y  LI+ Y NGA +RL DVA + D  ++ R A   N   A+LL I++ P AN+I+ VD I
Sbjct: 241  YAELILAYKNGAPLRLKDVAQIVDGAENERLAAWANENQAVLLNIQRQPGANVIEVVDRI 300

Query: 301  RAKLPELRAMIPAAIDLQIAQDRSPTIRASLQEVEETLAISVALVILVVFLFLRSGRATL 360
            +A LP +   +PA +D+ +  DR+ TIRAS+ +V+  L I++ALV++V FLFLR   AT+
Sbjct: 301  KALLPSITDNLPAGLDVTVLTDRTQTIRASVTDVQHELLIAIALVVMVTFLFLRRASATI 360

Query: 361  IPAVAVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENIARHLEAGMKP 420
            IP++AVP+SLIGTF  MYL GFS+NNL+LMALTIATGFVVDDAIV+LENI+R +E G  P
Sbjct: 361  IPSIAVPLSLIGTFGVMYLAGFSVNNLTLMALTIATGFVVDDAIVMLENISRFIEEGDSP 420

Query: 421  LQAALQGTREVGFTVISMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLVVSLT 480
            LQAAL+G +++GFT+IS++LSL+AV +PLL M  + GRL REFA+TL+VAI ISLVVSLT
Sbjct: 421  LQAALKGAKQIGFTLISLTLSLIAVLIPLLFMADVVGRLFREFAITLAVAILISLVVSLT 480

Query: 481  LTPMMCGWMLK-SSKPRTQPR-KRGVGRLLVALQQGYGTSLKWVLNHTRLVGVVFLGTVA 538
            LTPMMC  +LK   KP  Q R  R  G  +  L   YG  L+WVL H  L  +V + T+ 
Sbjct: 481  LTPMMCARLLKREPKPEEQGRFYRASGAWIDWLIAAYGRKLQWVLKHQPLTLLVAVATLG 540

Query: 539  LNIWLYIAIPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLQDFMKIIRDDPAVNNVTGF 598
            L ++LYI +PK FFP QDTGV+ G  +A QSISF AM  + Q+  K+I  DPAV +++ +
Sbjct: 541  LTVFLYIVVPKGFFPVQDTGVIQGISEAPQSISFAAMSQRQQELAKVILADPAVQSLSSY 600

Query: 599  TG----GSRVNSGMMFITLKPRGERKETAQQIIDRLRVKLAKEPGARLFLMAVQDIRVGG 654
             G     + +NSG + I LKP  ER  +A Q+I RL+ +L K  G RLF+  VQD+ +  
Sbjct: 601  IGVDGDNATLNSGRLLINLKPHKERDLSAAQVISRLQPQLDKLVGIRLFMQPVQDLTIED 660

Query: 655  RQANASYQYTLLSDSLAALREWEPKIRKALSALPQLADVNSDQQDNGAEMNLIYDRDTMS 714
            R +   YQ+++ S     L  W  ++ +AL   P+L DV SD QD G ++ L+ DRD  S
Sbjct: 661  RVSRTQYQFSMSSPDAEMLSLWSGRLVEALHKQPELTDVASDLQDKGLQVYLVIDRDAAS 720

Query: 715  RLGIDVQAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRYSQDISALEKMFVINRDGK 774
            R+G+ V      L +AFGQRQISTIY   +QY+VVM+          ALE++ V   +G 
Sbjct: 721  RIGVSVSNITDALYDAFGQRQISTIYTQASQYRVVMQAQDGEKIGPQALEQIHVKTTNGG 780

Query: 775  AIPLSYFAQWRPANAPLSVNHQGLSAASTIAFNLPTGTSLSQATEAINRTMTQLGVPSTV 834
             + LS  A      A L++ H G   A  ++FNL  G +L QA E IN+    +G+P  V
Sbjct: 781  QVRLSSLAHVEERQAQLAIAHIGQFPAVMMSFNLAPGVALGQAVELINKVQQDIGMPLGV 840

Query: 835  RGSFSGTAQVFQQTMNSQLILIVAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLA 894
            +  F G AQ F+ +++S L+LI+AA+ T+YIVLG+LYESY+HP+TILSTLPSA VGALLA
Sbjct: 841  QTQFQGAAQAFEASLSSTLLLILAAVVTMYIVLGVLYESYIHPITILSTLPSAAVGALLA 900

Query: 895  LELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRSGGLTPEQAIFQACLLRFRPI 954
            L L      +IA+IGI+LLIGIVKKNAIMM+DFAL+A+R+ G+ P  AI+QA LLRFRPI
Sbjct: 901  LILSGNDLGMIAIIGIILLIGIVKKNAIMMIDFALDAERNQGMDPATAIYQAALLRFRPI 960

Query: 955  MMTTLAALFGALPLVLSGGDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLR 1014
            +MTTLAALFGA+PL+L+ G G+ELRQPLG+ +VGGL++SQ+LTL+TTPV+YL+FDRL  R
Sbjct: 961  LMTTLAALFGAVPLMLATGSGAELRQPLGLVMVGGLLVSQVLTLFTTPVIYLYFDRLGRR 1020

Query: 1015 FSR 1017
            + R
Sbjct: 1021 WRR 1023