Pairwise Alignments

Query, 1026 a.a., Multidrug transporter MdtC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 1066 a.a., MMPL family transporter from Rahnella sp. WP5

 Score =  910 bits (2351), Expect = 0.0
 Identities = 485/1055 (45%), Positives = 695/1055 (65%), Gaps = 39/1055 (3%)

Query: 6    LFIYRPVATILIAAAITLCGILGFRLLPVAPLPQVDFPVIMVSASLPGASPETMASSVAT 65
            LFI RPVATIL+  A+ L GI  + +L  + LPQVD+P I V+   PGASP+ MAS +  
Sbjct: 6    LFILRPVATILLMVAVLLSGIFAYNMLSTSALPQVDYPTIQVTTLYPGASPDVMASGITA 65

Query: 66   PLERSLGRIAGVNEMTSSSSLGSTRIILEFNFDRDINGAARDVQAAINAAQSLLPGGMPS 125
            PLER LG++AG+++M S+S+ GS+ I L+F+ D  ++ A ++VQAAINAA SLLP  +P+
Sbjct: 66   PLERQLGQMAGLSQMYSTSASGSSIITLKFSLDLSLDVAEQEVQAAINAADSLLPSDLPN 125

Query: 126  RPTYRKANPSDAPIMILTLTSESWSQGKLYDFASTQLAQTIAQIDGVGDVDVGGSSLPAV 185
             PTY+K NP+DA ++ L  TSES    K+ D  +T++A  ++QI GVG V + G   PA+
Sbjct: 126  PPTYKKVNPADAAVLTLAATSESLPLTKVQDLVNTRVALKLSQISGVGMVTLAGGHQPAI 185

Query: 186  RVGLNPQALFNQGVSLDEVREAIDSANVRRPQGAIEDSVHRWQIQTNDELKTAAEYQPLI 245
            RV ++P+ L    +S++ +   I ++NV   +G  +   H   I  ND+L+TAAEY  LI
Sbjct: 186  RVQVDPRKLAAHNLSMETINTLIGNSNVNGSKGGFDGPHHSITIDANDQLRTAAEYGNLI 245

Query: 246  IHYNNGAAVRLGDVASVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDGIRAKLP 305
            ++Y NGAA+RL DVA+++++ ++   +   N +PAI++ +++ P AN+IQ VD I+A+LP
Sbjct: 246  VNYENGAALRLRDVATLSEAAENQYLSAWANKQPAIIISVQRQPGANVIQVVDAIKAQLP 305

Query: 306  ELRAMIPAAIDLQIAQDRSPTIRASLQEVEETLAISVALVILVVFLFLRSGRATLIPAVA 365
            +L+  +P ++ + +  DR+ TIRAS+ +V+  L +S+ALV++V FLFLR+  ATLIP+VA
Sbjct: 306  KLQEALPESVKISVISDRTQTIRASISDVQFELLLSIALVVMVTFLFLRNVAATLIPSVA 365

Query: 366  VPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENIARHLEAGMKPLQAAL 425
            VP+SL+GTF  MYLCGFSLNNLSLMALTIATGFV+DDAIVV+ENI+R LE G  P+QAAL
Sbjct: 366  VPLSLVGTFGVMYLCGFSLNNLSLMALTIATGFVIDDAIVVVENISRRLEEGETPMQAAL 425

Query: 426  QGTREVGFTVISMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLVVSLTLTPMM 485
            +G++++GFT+IS++ SL+AV +PLL MG + GRL REFA+TL+V+I +S+VVSLTLTPM+
Sbjct: 426  KGSQQIGFTIISLTFSLIAVLIPLLFMGDVVGRLFREFAITLAVSILVSMVVSLTLTPML 485

Query: 486  CGWMLKSSKPRTQPR-KRGVGRLLVALQQGYGTSLKWVLNHTRLVGVVFLGTVALNIWLY 544
            C ++L+ +    Q +  R  G     +  GY   L  VLNH +L  +V   T+     LY
Sbjct: 486  CAYLLRHTPEEKQSKFYRKGGEFFDKMIAGYDRMLIVVLNHQKLTLLVAAATLVFTALLY 545

Query: 545  IAIPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLQDFMKIIRDDPAVNNVTGFTG---- 600
            + +PK FFP QDTG++ G  QA Q +SF  M  + Q     I +DP V +V+   G    
Sbjct: 546  VIVPKGFFPSQDTGMIQGITQASQDVSFSEMGRRQQLLTAAILNDPDVESVSSTIGVDGN 605

Query: 601  GSRVNSGMMFITLKPRGERKETAQQIIDRLRVKLAKEPGARLFLMAVQDIRVGGRQANAS 660
             + +NSG + I+LK   ER E A  II+RL+ + A  PG  L++ A QD+ V  +   + 
Sbjct: 606  NTSLNSGRLQISLKSFDERSERAPAIIERLKQETAGVPGIELYMQASQDLTVDDQVTPSQ 665

Query: 661  YQYTLLSDSLAALREWEPKIRKALSALPQLADVNSDQQDNGAEMNLIYDRDTMSRLGIDV 720
            YQ+TL       L +W PK+ + LSALP+ ++V S+ Q+ G    +  DRD  +R GI  
Sbjct: 666  YQFTLDDADSENLVQWTPKLIEKLSALPEFSEVVSNLQNQGQIAYVELDRDAAARYGITA 725

Query: 721  QAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRYSQDISALEKMFVINRDGKA----- 775
               ++ L NAFGQR +STI+   NQY+VV+EV P++ Q  ++ + +++   +  +     
Sbjct: 726  SDVDTALYNAFGQRLVSTIFTQANQYRVVLEVAPQFQQSPASFDDVYLATNNSTSTSGTV 785

Query: 776  -----------------------------IPLSYFAQWRPANAPLSVNHQGLSAASTIAF 806
                                         + L+  A+       L         A T++F
Sbjct: 786  ATTTSTTSSSTSDSGTSTTTTNAGATNGMVKLTSIAKIHMRTGALLQARLNQFPAVTVSF 845

Query: 807  NLPTGTSLSQATEAINRTMTQLGVPSTVRGSFSGTAQVFQQTMNSQLILIVAAIATVYIV 866
            NL  G SL QA +AI  T+  + +P ++   + G A  F+    + L LI+AA+ T+Y+V
Sbjct: 846  NLKDGYSLEQAQQAIKTTVADIAMPDSITLRYQGAAASFESATGNTLWLILAALLTMYVV 905

Query: 867  LGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVD 926
            LGILYES++HP+TILSTLPSA VGALL+L      FSLIALIG++LLIGIVKKNAIMM+D
Sbjct: 906  LGILYESFIHPVTILSTLPSAAVGALLSLIFAGTEFSLIALIGVILLIGIVKKNAIMMID 965

Query: 927  FALEAQRSGGLTPEQAIFQACLLRFRPIMMTTLAALFGALPLVLSGGDGSELRQPLGITI 986
            FAL+A+   GL+P +AI QACLLRFRPIMMTT+AAL GALPL+L+ G G+ELRQPLG+ I
Sbjct: 966  FALDAENKQGLSPREAIHQACLLRFRPIMMTTMAALLGALPLMLASGSGAELRQPLGLVI 1025

Query: 987  VGGLVMSQLLTLYTTPVVYLFFDRLRLRFSRKNSK 1021
            VGGL+ SQ+LTL++TPV+YL FDRL  R + ++ +
Sbjct: 1026 VGGLIFSQVLTLFSTPVIYLMFDRLSHRLNPRHRR 1060