Pairwise Alignments

Query, 1026 a.a., Multidrug transporter MdtC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 1041 a.a., MMPL family transporter from Rahnella sp. WP5

 Score = 1116 bits (2887), Expect = 0.0
 Identities = 577/1021 (56%), Positives = 761/1021 (74%), Gaps = 16/1021 (1%)

Query: 1    MRFFALFIYRPVATILIAAAITLCGILGFRLLPVAPLPQVDFPVIMVSASLPGASPETMA 60
            M     FI+RPVAT+L+  AI L G+LG+RLLPVAPLPQVDFP I+VSASLPGASPETMA
Sbjct: 1    MNISRFFIFRPVATLLLTMAILLLGLLGYRLLPVAPLPQVDFPTILVSASLPGASPETMA 60

Query: 61   SSVATPLERSLGRIAGVNEMTSSSSLGSTRIILEFNFDRDINGAARDVQAAINAAQSLLP 120
            ++VATPLER+LG+IAGV EMTS SS  ST +IL+F+ DRDINGAARDVQAAINA+++LLP
Sbjct: 61   ATVATPLERALGQIAGVTEMTSRSSQSSTSVILQFDLDRDINGAARDVQAAINASRALLP 120

Query: 121  GGMPSRPTYRKANPSDAPIMILTLTSESWSQGKLYDFASTQLAQTIAQIDGVGDVDVGGS 180
              MPS PTYRKANPSDAPI++L LTS + S+G+LYD AS+QL Q IAQ++GVG V + GS
Sbjct: 121  SSMPSLPTYRKANPSDAPIIMLALTSATRSKGELYDIASSQLQQKIAQVNGVGQVSLVGS 180

Query: 181  SLPAVRVGLNPQALFNQGVSLDEVREAIDSANVRRPQGAIEDSVHRWQIQTNDELKTAAE 240
            +LP VR+ L P+A+ + G+SLD +R AI  +    P+G ++ S   W I+ N +  TAA+
Sbjct: 181  ALPGVRIDLRPEAVTSYGISLDTIRAAIADSTSNLPKGLLQGSDQSWMIEGNGQQSTAAQ 240

Query: 241  YQPLIIHYNNGAAVRLGDVASVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDGI 300
            Y+ LI+ Y NG+A+RL D+A+V DSV+D  N G  N+ P++++ + +   AN+++T+  I
Sbjct: 241  YKTLIVTYINGSAIRLSDIANVYDSVEDKYNVGYYNSTPSVMIGVTRQAGANMLETIQAI 300

Query: 301  RAKLPELRAMIPAAIDLQIAQDRSPTIRASLQEVEETLAISVALVILVVFLFLRSGRATL 360
            +A LP ++  +P  + L +A DRSP + ASL++ E TL  +  LVI VVF+FLR+  A L
Sbjct: 301  KAALPLMKESLPGDVQLNLALDRSPNVSASLRDTEMTLMEATLLVIAVVFVFLRNWNAVL 360

Query: 361  IPAVAVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENIARHLEAGMKP 420
            IPAVA+PVSLIGT A MYL G+SL+NLS+MAL I+TGFVVDDAIVVLENI RH+E GM P
Sbjct: 361  IPAVALPVSLIGTCAVMYLLGYSLDNLSMMALIISTGFVVDDAIVVLENITRHIEEGMGP 420

Query: 421  LQAALQGTREVGFTVISMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLVVSLT 480
            ++AAL+G +EV FTV+SM+LSL+AVF+P+LLMG + GRL REFAVTLSV++ IS++VSL+
Sbjct: 421  VRAALKGAQEVSFTVLSMTLSLIAVFIPILLMGSIVGRLFREFAVTLSVSLIISMLVSLS 480

Query: 481  LTPMMCGWMLKSSKP--RTQPR-----KRGVGRLLVALQQGYGTSLKWVLNHTRLVGVVF 533
            LTPM+C   LK   P  + QPR     + G+ +LL A    Y  +L WV+ H  +  V  
Sbjct: 481  LTPMLCARFLKRKPPVEKRQPRIYRMIEHGLNKLLAA----YSAALGWVMRHQLITLVGL 536

Query: 534  LGTVALNIWLYIAIPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLQDFMKIIRDDPAVN 593
              TV LN +LY  + K FFP+QDTG+LMG ++ADQ+ SFQ+++ ++  + KII+DDPAV 
Sbjct: 537  FLTVILNFYLYTVVEKGFFPDQDTGMLMGMLRADQNTSFQSIQPQVLKYSKIIQDDPAVE 596

Query: 594  NVTGFTG----GSRVNSGMMFITLKPRGERKETAQQIIDRLRVKLAKEPGARLFLMAVQD 649
             V    G    GSR N+   F+ LK   +R  TA Q+ +RL +   KEPGA+LFLMA QD
Sbjct: 597  AVMSSAGSGGFGSR-NTATFFVRLKDFDKRTSTANQVANRLMMATGKEPGAQLFLMAAQD 655

Query: 650  IRVGGRQANASYQYTLLSDSLAALREWEPKIRKALSALPQLADVNSDQQDNGAEMNLIYD 709
            + +GGR ANA YQY+L SD L+ LREW PK++KAL+ LPQL  V+SD Q  G E+ L  D
Sbjct: 656  LHIGGRSANAQYQYSLQSDDLSVLREWAPKVQKALAKLPQLTGVDSDAQTGGQEVMLNID 715

Query: 710  RDTMSRLGIDVQAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRYSQDISALEKMFVI 769
            RD  ++LG++V+  ++LLNN+F QRQ++TIY+ +NQY VVM +   Y+ +   L +++V+
Sbjct: 716  RDRATQLGVNVKMIDTLLNNSFSQRQVATIYKTLNQYHVVMNLTSDYTSNPDVLHQLYVV 775

Query: 770  NRDGKAIPLSYFAQWRPANAPLSVNHQGLSAASTIAFNLPTGTSLSQATEAINRTMTQLG 829
               G  +PLS FA +  ANAPLSV+HQG +A +TIAFNL  G +L  A  A+   M Q+G
Sbjct: 776  TDSGNQVPLSAFATFSGANAPLSVSHQGQTATTTIAFNLADGYALEDAQAALKTAMAQIG 835

Query: 830  VPSTVRGSFSGTAQVFQQTMNSQLILIVAAIATVYIVLGILYESYVHPLTILSTLPSAGV 889
            +P TV GS++GTAQ F+   +S   LI+AA+A VYIVLG+LYESY+HPLTILSTLPSAG+
Sbjct: 836  LPDTVHGSYAGTAQAFEALASSMPWLILAALAAVYIVLGVLYESYIHPLTILSTLPSAGL 895

Query: 890  GALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRSGGLTPEQAIFQACLL 949
            GALL + + N   ++IALIGI+LLIGIVKKNAIMM+DFAL+A+R  GLTP+QAI QACL+
Sbjct: 896  GALLLMLMTNTQLTVIALIGILLLIGIVKKNAIMMIDFALDAERRLGLTPQQAITQACLM 955

Query: 950  RFRPIMMTTLAALFGALPLVLSGGDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFD 1009
            RFRPI+MTTLAA FGALPL +  G  ++LR PLG+ I GGL +SQ+LTL+TTPVVYL+ D
Sbjct: 956  RFRPILMTTLAAFFGALPLAMGSGGDADLRSPLGLAIAGGLALSQILTLFTTPVVYLYMD 1015

Query: 1010 R 1010
            R
Sbjct: 1016 R 1016