Pairwise Alignments

Query, 470 a.a., Multidrug transporter MdtD from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 467 a.a., major facilitator transporter from Herbaspirillum seropedicae SmR1

 Score =  301 bits (771), Expect = 3e-86
 Identities = 158/453 (34%), Positives = 256/453 (56%), Gaps = 11/453 (2%)

Query: 14  IVAFGFFMQSLDTTIVNTALPSMAKSLGESPLHMHMVVVSYVLTVAVMLPASGWLADKIG 73
           IVA   FM+ +D+T+++T+LP++A  +   P+ + + + SY++++AV +P SGW+AD+ G
Sbjct: 12  IVACALFMEQMDSTVISTSLPALALDMNVDPISLKLALTSYLVSLAVFIPISGWMADRFG 71

Query: 74  VRNIFFAAIVLFTLGSLFCALSGTLNQLVLARVLQGVGGAMMVPVGRLTVMKIVPRAQYM 133
              IF +AI +F LGS+ C +S TL Q V AR LQG+GGAMMVPVGRL +++ V +   +
Sbjct: 72  SLTIFRSAICVFMLGSILCGVSSTLPQFVAARFLQGIGGAMMVPVGRLVILRSVEKVNLV 131

Query: 134 AAMTFVTLPGQIGPLLGPALGGVLVEYASWHWIFLINIPVGIVGAMATFMLMPNYIIE-T 192
            A++++T+P   GP+LGP LGG +  Y  W WIF INIP+ I+G       +P+   E  
Sbjct: 132 KALSYLTIPALFGPVLGPPLGGFITTYFHWRWIFFINIPISILGLYLATRFIPDLKAEQV 191

Query: 193 RRFDLPGFLLLAIGMAVLTLALDGSKSMGISPWTLAGLAAGGAAAILLYLFHAKKNSGAL 252
              DL GFLL A+G ++L + L  +    +S          G   +  Y++HA++ S  L
Sbjct: 192 APLDLKGFLLSALGCSLLMMGLATAGRHLVSGEVALTCVLAGLVFLAAYVWHARRASAPL 251

Query: 253 FSLRLFRTPTFSLGLLGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMG 312
             L L + PT   G+ G    R+G G +PF+ P+ LQ+G G++PFH+G++      G+M 
Sbjct: 252 IDLALLKIPTLRAGVFGGSFYRVGIGAIPFLLPLMLQLGFGYTPFHSGMLTCASAAGAMF 311

Query: 313 MKRIVVQIVNRFGYRRVLVAT----TLGLALVSLLFMSVALLGWYYLLPLVLLLQGMVNS 368
           MK I  + + R+G+RRVL+       LGL  ++           Y L+ ++LL+ G   S
Sbjct: 312 MKTIAARFLRRYGFRRVLLVNGALGVLGLWAIATFTPQTP----YLLMVVILLIGGCFRS 367

Query: 369 ARFSSMNTLTLKDLPDTLASSGNSLLSMIMQLSMSIGVTIAGMLLGMFGQQHIGIDSSAT 428
            +F+S+N ++  D+     S   S+ S+  QLS+ +GV +AG  L M     I   ++  
Sbjct: 368 LQFTSLNAISYADVDKLRLSQATSMASVAQQLSIGMGVVLAGFALQM--SNEIQGHATLV 425

Query: 429 HHVFMYTWLCMAVIIALPAIIFARVPNDTQQNM 461
              F   +L +  + A   ++  ++P+D    M
Sbjct: 426 AQDFWPAFLVVGAVAACALLMLRQLPHDAGAEM 458