Pairwise Alignments

Query, 231 a.a., Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 231 a.a., 16S rRNA pseudouridine(516) synthase from Vibrio cholerae E7946 ATCC 55056

 Score =  263 bits (672), Expect = 2e-75
 Identities = 132/230 (57%), Positives = 164/230 (71%), Gaps = 1/230 (0%)

Query: 1   MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGDIIKNAAFKLLPEHAVAYDGNPLAQQHGP 60
           MRLDKF+   LG +R  A + ++   VTVD  + K+ AFKL     V + G  +   HGP
Sbjct: 1   MRLDKFLCDALGTTRKEATQLLKSGEVTVDDVVQKSGAFKLKETSCVEWQGREITL-HGP 59

Query: 61  RYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAYKLHAAGRLDIDTTGLVLMTDDGQWSHR 120
           RY M++KP G VCS +D  + T L  LDE     LH AGRLD+DTTGL+L+TDDGQWSHR
Sbjct: 60  RYIMMHKPDGVVCSHEDGFNQTALTLLDEVNIQDLHFAGRLDVDTTGLLLITDDGQWSHR 119

Query: 121 ITSPRHHCEKTYLVTLESPVADDTAAQFAKGVQLHNEKDLTKPATLEVITPVQVRLTISE 180
           +TSP+H CEKTY V L  P+  D A QF +G++L  E++LT PA LEVI+  +V LTI E
Sbjct: 120 VTSPKHKCEKTYRVWLADPIQADYAEQFNRGIELRGERELTLPAQLEVISETEVLLTIHE 179

Query: 181 GRYHQVKRMFAAVGNRVVELHRERIGAITLDENLAPGEYRPLTEEEIASV 230
           G+YHQVKRMFAA+GN+V+ LHRERIG ITLDE L PGEYR LTEEE+AS+
Sbjct: 180 GKYHQVKRMFAALGNKVIGLHRERIGQITLDETLEPGEYRYLTEEEVASI 229