Pairwise Alignments

Query, 269 a.a., Nitrite transporter NirC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 324 a.a., formate transporter, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 90.9 bits (224), Expect = 3e-23
 Identities = 79/271 (29%), Positives = 123/271 (45%), Gaps = 43/271 (15%)

Query: 31  SAMAGAYVGLGIILIFTLGNLLDPSVRPLVM---GATFGIALTLVIIAGSELFTGHTMFL 87
           +  AGA++ L  +   T+      S   LV    G  F + L LV+I G ELFT  ++  
Sbjct: 50  AVFAGAFIALAFVFYLTVTTGAGDSAWGLVRLVGGIAFSLGLILVVICGGELFTS-SVLS 108

Query: 88  TLGVKAGTISHGQMWAILPQTWLGNLVGS------VFVALLY-----SWGGGSLLPVDTS 136
           ++      ++  ++     + +LGN VG+      +  A LY     +WG  +L      
Sbjct: 109 SVAWAQKQVTTSELLKCWTRVYLGNFVGAMLMVGLIMAAGLYELDGGNWGLNALKVAQHK 168

Query: 137 IVHSVALAKTTAPATVLFFKGALCNWLVCLAIWMAIRT-EGTAKFLAIWWCLLAFIASGY 195
           + H+   A         F  G LCN LVCL IWM   + E   K + +   +  F++SG+
Sbjct: 169 LHHTWIQA---------FSLGILCNMLVCLGIWMTFASRESLTKAILLILPVAMFVSSGF 219

Query: 196 EHSVANM-------TLFALS---WFG-------HHSDAYTLAGIGHNLLWVTLGNTLSGV 238
           EHS+AN+       T+ A++   +F          +D      I  NL+ VTLGN + G 
Sbjct: 220 EHSIANLFMVPFGITIQAVASPEFFASLGVTQEQFADLTVANFIFKNLIPVTLGNIVGGG 279

Query: 239 VFMGLGYWYATP-KSERPAPAKINQPEAAAN 268
           V +GLGYW+    +   P P K +QP   A+
Sbjct: 280 VIVGLGYWWIEQGQIALPDPQKSHQPHFFAS 310