Pairwise Alignments

Query, 205 a.a., Putative inner membrane protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 238 a.a., Protein of unknown function UPF0126 (NCBI) from Rhodospirillum rubrum S1H

 Score =  116 bits (291), Expect = 3e-31
 Identities = 61/187 (32%), Positives = 97/187 (51%)

Query: 10  GITAEAMTGALAAGRRRMDTFGVIIIATATAIGGGSVRDILLGHYPLGWVKHPEYVIIVA 69
           G+   A++G L A R+ MD  G  ++AT T IGGG+ RD++LG  P+ WV+ P Y+++  
Sbjct: 36  GLIVFAVSGGLVAARKGMDIVGFALMATVTGIGGGTFRDMVLGMTPVFWVREPHYLVVCL 95

Query: 70  TAAVLTTIVAPVMPYLRKLFLVLDALGLVVFSIIGAQIALDMGEGPIIAVVAAVTTGVFG 129
              +LT  VA  +   ++  L  DA+G+  F+++G Q+ L    G  +A++  V T  FG
Sbjct: 96  AVGILTWFVAHRLDSRQRALLWADAIGIAFFTVVGTQVGLRAEAGISVALLMGVMTACFG 155

Query: 130 GVLRDMFCKRIPLVFQKELYAGISFASAVLYIALQHYVMNPDVVVISTLLFGFTARLLAL 189
           G++RD+      L+ Q+E+Y     A A  Y+          V  + +    F  R  AL
Sbjct: 156 GIVRDLLAGEPSLILQREIYITACVAGACAYLLFDAMGAGEGVSGVVSFCVTFLVRGAAL 215

Query: 190 RLKLGLP 196
              L LP
Sbjct: 216 AFGLSLP 222



 Score = 38.9 bits (89), Expect = 8e-08
 Identities = 19/56 (33%), Positives = 29/56 (51%)

Query: 92  LDALGLVVFSIIGAQIALDMGEGPIIAVVAAVTTGVFGGVLRDMFCKRIPLVFQKE 147
           LD  GL+VF++ G  +A   G   +   + A  TG+ GG  RDM     P+ + +E
Sbjct: 32  LDTFGLIVFAVSGGLVAARKGMDIVGFALMATVTGIGGGTFRDMVLGMTPVFWVRE 87



 Score = 26.6 bits (57), Expect = 4e-04
 Identities = 29/114 (25%), Positives = 42/114 (36%), Gaps = 26/114 (22%)

Query: 9   IGITAEAMTGALAAGRRRMDTFGVIIIATATAIGGGSVRDILLGHYPLGWVKHPEYVIIV 68
           IGI    + G     R        +++   TA  GG VRD+L G          E  +I+
Sbjct: 121 IGIAFFTVVGTQVGLRAEAGISVALLMGVMTACFGGIVRDLLAG----------EPSLIL 170

Query: 69  ATAAVLTTIVAPVMPYLRKLFLVLDALG-----------LVVFSIIGAQIALDM 111
                +T  VA    Y     L+ DA+G            V F + GA +A  +
Sbjct: 171 QREIYITACVAGACAY-----LLFDAMGAGEGVSGVVSFCVTFLVRGAALAFGL 219