Pairwise Alignments

Query, 205 a.a., Putative inner membrane protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 208 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  152 bits (383), Expect = 5e-42
 Identities = 79/192 (41%), Positives = 115/192 (59%), Gaps = 1/192 (0%)

Query: 8   LIGITAEAMTGALAAGRRRMDTFGVIIIATATAIGGGSVRDILLGHYPLGWVKHPEYVII 67
           L G    A++GALAAGR RMD FGVI++A+ TA+GGGS+RD L+G  P+ W++ P Y+I+
Sbjct: 10  LCGTAVFALSGALAAGRHRMDPFGVIVLASVTAVGGGSIRDALIGATPVFWIRDPNYIIV 69

Query: 68  V-ATAAVLTTIVAPVMPYLRKLFLVLDALGLVVFSIIGAQIALDMGEGPIIAVVAAVTTG 126
           + AT      +V       +    V DALGL +F++IGA+ AL+MG   +IAVV  + TG
Sbjct: 70  ILATVLACLLLVRRPRKMPQYTLPVADALGLALFTVIGAEKALNMGLSGMIAVVMGLITG 129

Query: 127 VFGGVLRDMFCKRIPLVFQKELYAGISFASAVLYIALQHYVMNPDVVVISTLLFGFTARL 186
           V GG++RD+ C++IP+V + E+YA  S    + Y     Y M     +   +      RL
Sbjct: 130 VGGGIIRDLLCRQIPMVLRTEIYATASIVGGIGYTVSLAYGMGEKTALFLAMTSALIIRL 189

Query: 187 LALRLKLGLPVF 198
            A++  L LP F
Sbjct: 190 CAIKWHLSLPAF 201



 Score = 28.1 bits (61), Expect = 1e-04
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 93  DALGLVVFSIIGAQIALDMGEGPIIAVVAAVTTGVFGGVLRDMFCKRIPLVFQKE 147
           D  G  VF++ GA  A      P   +V A  T V GG +RD      P+ + ++
Sbjct: 9   DLCGTAVFALSGALAAGRHRMDPFGVIVLASVTAVGGGSIRDALIGATPVFWIRD 63