Pairwise Alignments

Query, 544 a.a., Nickel ABC transporter, periplasmic nickel-binding protein nikA2 (TC 3.A.1.5.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 521 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  111 bits (277), Expect = 8e-29
 Identities = 126/474 (26%), Positives = 200/474 (42%), Gaps = 72/474 (15%)

Query: 92  LTEKVDTSPDGKIWTLTLKPGLKFSDGSPLTAEDVVFTYNKAAKSGGKI-DMG------N 144
           L E    S DGK +T TL+ G+KF DGS   AE V F +++  K      D G      N
Sbjct: 79  LAESWKISDDGKTYTFTLRQGVKFHDGSNFDAEAVKFNFDRMLKKDHPFYDTGPFPLSFN 138

Query: 145 FSHARA---LDARRIEMTLSHPQSTFVNVL----GSLGIVPASRYDEKTFAREPIGAGPY 197
           F+  +A   LD   +E  LS   + F++ L    G +    A     K + R P G GP+
Sbjct: 139 FASVKAVNVLDEHTVEFKLSEAFAPFLSNLAYPTGLIVSPVAVEKHGKEYGRSPSGTGPF 198

Query: 198 RLVSFQPGQQLIVEANPWYAGKKNDFNRLVF-VFLDEDNAYAAARSGQLGLVRIAPSMAV 256
           + V +   Q+++VE NP Y         +VF    D +   A   +G + ++   P    
Sbjct: 199 KFVEWLSNQRVVVERNPDYWDSAAKLQAVVFRPITDANTRVAEMMAGGIDVMVEVP---- 254

Query: 257 APQQDNLKLWVRDS----VENRGIVFPMVPAGKKDANDYPVGNDVTADVAIRRAINYAIN 312
               DNL  + +D+     E  G   P V     +    P      AD  +R+A NYA+N
Sbjct: 255 ---PDNLATFEQDANFAVAEQAG---PHVWFTILNTKQGPF-----ADKRVRQAANYAVN 303

Query: 313 RKQLAEQVMEGHAIPAYSAV-QGLPWQNPSVIFSDGDIAKARAILEEAGWKINSAGVREK 371
           ++ L + V+ G A  A   +     W   SV     D  KA+A+L EAG           
Sbjct: 304 KQTLVDDVLRGTATVAAGPIPPAFNWVESSVEPYAHDPEKAKALLAEAG----------- 352

Query: 372 AGKEARLTLWYASGDSTRRD---LAEAVRAMLQPLGIVVSLQSGSWETVERHMHANPTLF 428
             +  ++T +   G S   D   +  A++A LQ +G  V +++  W T    +  NP L 
Sbjct: 353 -VENPQVTFYVTEGGSGMLDPITMGAAIQADLQAVGFKVKIETYEWNTFLGRV--NPGLE 409

Query: 429 G--------WGSLDPMELFHHYSGKAAGVEY--YNPGYYSNPAVEAHLKQAIDAPDWQKA 478
           G        W + DP  + +      A  +   +N GYYSNP ++  L++A  + D  + 
Sbjct: 410 GKADMAEMAWMTNDPDTVPYLTLRTDAMPDKGGFNSGYYSNPQLDELLEKARRSTDQAER 469

Query: 479 IPFWQQVEWDGKQGAGVQGDAAWAWLLNIQHTYLANPCIDLGKGAP----EIHG 528
              + +V+      + V  DA W ++ N +   +    +   K  P    ++HG
Sbjct: 470 GKLYGEVQ------SIVHDDAPWLFVANWKQNAVTTAAVKGFKLQPSFLLDLHG 517