Pairwise Alignments

Query, 211 a.a., putative transcriptional repressor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 211 a.a., helix-turn-helix domain containing protein from Rhodopseudomonas palustris CGA009

 Score =  109 bits (273), Expect = 3e-29
 Identities = 70/196 (35%), Positives = 101/196 (51%), Gaps = 4/196 (2%)

Query: 9   AKKSRGRPKVFDREAALDKAMTLFWQHGYEATSLADLVEATGAKAPTLYAEFTNKKGLFR 68
           A + RGRP+ FDR  AL +A  LFW  GYEATS+ADL EA G  AP+LYA F +K+ L+ 
Sbjct: 13  AARPRGRPRAFDRARALAQATRLFWIKGYEATSIADLTEAMGIGAPSLYAAFGSKEALYG 72

Query: 69  AVLDRYITRFASKHEAQLFCEEKSVESALEDYFTEIAACFTST--DTPAGCFMINTSATL 126
             +  Y   +      + F    S  +ALE +  + A+  T    D P GC M+  SA  
Sbjct: 73  EAVRHYEANYEQLVWGR-FRTATSARAALEAFLLDSASALTGAPDDHPLGC-MVTLSAVG 130

Query: 127 AASSRDIARTVKSRHAMQEQTLIQFLRQRQERGEIPAHCNPQALAEYINCILQGMSISAR 186
           +    ++   V+S  A+  Q L   L +     E+P   +  A+A +   +  GMSI AR
Sbjct: 131 SEGHAELGELVRSARAVTLQRLEARLSEAIAVSELPTSTDIHAVARFYQAVQAGMSILAR 190

Query: 187 EGATFEQLMQITRTTL 202
           +GA+  +L  + R  L
Sbjct: 191 DGASRAELEAVARLAL 206