Pairwise Alignments

Query, 553 a.a., Flagellar hook-associated protein FlgK from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 688 a.a., Flagellar hook-associated protein FlgK from Pseudomonas fluorescens FW300-N2E2

 Score =  233 bits (595), Expect = 1e-65
 Identities = 146/445 (32%), Positives = 239/445 (53%), Gaps = 14/445 (3%)

Query: 3   SLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGGWIGNGVYVSG 62
           SL+N  MSGL+A+Q AL T  NNI N + AGY+RQ T+     S      +IG+G  ++ 
Sbjct: 2   SLLNIGMSGLSASQTALVTTGNNIANVDTAGYSRQQTVQTTKASNQYGNVFIGSGTTLAD 61

Query: 63  VQREYDAFITNQLRGAQNQSSGLTTRYEQMSKIDNLLADKSSSLSGSLQSFFTSLQTLVS 122
           V+R Y++++  QL+   + +S       Q++ +D+LL+D  + L+G+L  FF S+Q + +
Sbjct: 62  VRRVYNSYLEAQLKTTTSLNSDAAAYQGQITPLDSLLSDSGTGLNGALTKFFASVQNVNA 121

Query: 123 NAEDPAARQALIGKAEGLVNQFKTTDQYLRDQDKQVNIAIGSSVAQINNYAKQIANLNDQ 182
              D A+RQ L+  A+ L N+F +    L  Q++ +N  + + V QINN A  +A LN +
Sbjct: 122 KPGDDASRQLLLSDAQALSNRFNSVASQLTAQNENINGNLSNMVDQINNLATTVAQLNKK 181

Query: 183 ISRMTGVGAGASPNDLLDQRDQLVSELNKIVGVEVSVQDGGTYNLTMANGYTLVQGSTAR 242
           I+ ++   AG +PNDLLD R + + +L+   G +V V++G + ++ + +G  LV G+   
Sbjct: 182 IAEVS--NAGGAPNDLLDARSETIRQLSTFTGTQV-VENGSSLDIYLGSGQPLVMGNITN 238

Query: 243 QLAAVPSSADPTRTTVAYVDEAAGNIEIPEKLLNTGSLGGLLTFRSQDLDQTRNTLGQLA 302
           +L AVP   DP R  +     +  ++    ++L  G +GGL+ +RS  LD   N LG++A
Sbjct: 239 KLEAVPDKNDPGRIGIQL--NSGSSVMDLTQVLTGGEIGGLMRYRSTVLDPAMNELGRVA 296

Query: 303 LAFADAFNAQHTKGYDADGNKGKDFF-SIGSPVVYSNSN-----NADKTVSLTAKVVDST 356
           L  AD  N+    G D +G  G + F SI S    S  +     N+  + +    + D+ 
Sbjct: 297 LVVADQMNSIQASGIDKNGAFGSNLFSSINSAAQMSQRSVASLGNSAGSGNFNVSIEDTG 356

Query: 357 KVQATDYKIVF-DGTDWQVTRTADNTTFTATKDADGKLE-IDGLKVTVGTG-AQKNDSFL 413
           K+   DYKI F   T++ V R  DNT+  A          +DG  +T   G A   DSF 
Sbjct: 357 KLTTNDYKITFTSATNYTVQRLPDNTSLGAFSTTTTPAPVVDGFSLTFANGPAAAGDSFK 416

Query: 414 LKPVSNAIVDMNVKVTNEAEIAMAS 438
           + P  NA   +  ++T+   +A+A+
Sbjct: 417 ITPTRNAAGSIKTEMTDSKRLAIAA 441



 Score = 25.8 bits (55), Expect = 0.006
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 482 VSDVGNKTSTLKTSSTTQANVVKQLYKQQQSVSGVNLDEEYGNL 525
           +S +    + L T+    ANV    Y +QQ+V       +YGN+
Sbjct: 8   MSGLSASQTALVTTGNNIANVDTAGYSRQQTVQTTKASNQYGNV 51