Pairwise Alignments

Query, 251 a.a., Flagellar basal-body rod protein FlgF from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 242 a.a., fagellar hook-basal body proteins from Pseudomonas stutzeri RCH2

 Score =  152 bits (385), Expect = 5e-42
 Identities = 91/250 (36%), Positives = 141/250 (56%), Gaps = 13/250 (5%)

Query: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVDGLSLATRTLVTAS 60
           MD   YTAM AAS+T+    V ++NLAN +TPGFRA L   +AV V+G    +R +    
Sbjct: 1   MDRLGYTAMTAASRTMMSLQVRSNNLANVNTPGFRADLERAQAVAVEGYGYDSRHMALIE 60

Query: 61  TPGADMTPGQLDYTSRPLDVALQQDGWLVVQAADGAEGYTRNGNIQVGPTGQLTIQGHPV 120
             G  +  G +  T R LD A++  G +V+Q  +G E YTR G++QV   G+LT+ G  V
Sbjct: 61  NNGVSLAAGPMVATGRELDFAVKGTGLIVLQDGEG-EAYTRQGSMQVDAEGRLTLNGRAV 119

Query: 121 IGEGGPITVPEGSEITIAADGTISALNPGDPPNTVAPVGRLKLVKAEGNEVQRSDDGLFR 180
           +GEGGPI +PE   + I  DGT+S + PGD    +A V R++LV      + ++  GL  
Sbjct: 120 LGEGGPIVLPEYDRMEIGNDGTVSVMAPGD--WMMAEVDRIRLVDVPAANLMKNQAGLL- 176

Query: 181 LTAEAQAERGAVLAADPS--IRIMSGVLEGSNVKPVEAMTDMIANARRFEMQMKVITSVD 238
           +T + +        A PS  +R+ SG LE SNV  ++ +   ++  R FE Q+K++ + +
Sbjct: 177 VTRDGE-------PAQPSEDVRLASGFLESSNVSAIDELASTMSLNRLFETQVKMMKAAE 229

Query: 239 ENEGRANQLL 248
           +     N+++
Sbjct: 230 DLSDAGNRMI 239