Pairwise Alignments

Query, 251 a.a., Flagellar basal-body rod protein FlgF from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 246 a.a., flagellar basal-body rod protein FlgF from Pseudomonas stutzeri RCH2

 Score =  181 bits (459), Expect = 1e-50
 Identities = 97/252 (38%), Positives = 143/252 (56%), Gaps = 7/252 (2%)

Query: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVDGLSLATRTLVTAS 60
           MD  +Y AM  ASQ    Q   A+NLAN ST GFR      R++ V G S   R    + 
Sbjct: 1   MDKMLYVAMTGASQNARAQQAHANNLANISTTGFRRDFEQARSMQVFGDSHPARVYAMSE 60

Query: 61  TPGADMTPGQLDYTSRPLDVALQQDGWLVVQAADGAEGYTRNGNIQVGPTGQL-TIQGHP 119
            P  D T G L  T R LD+A++ +GW+ VQA DG+E Y R G++ +   G L T  G P
Sbjct: 61  RPATDFTSGTLQETGRDLDIAIEGEGWIAVQAPDGSEAYVRTGSLNIDVLGMLRTADGMP 120

Query: 120 VIGEGGPITVPEGSEITIAADGTISALNPGDPPNTVAPVGRLKLVKAEGNEVQRSDDGLF 179
           V+G GGPI +P   +I +  DGTIS    G+ PN V  V R+KLV  +  ++++  DGL 
Sbjct: 121 VMGNGGPIAIPPEEKIDVGHDGTISIRALGENPNIVVTVDRIKLVNPDPKQLEKGTDGLI 180

Query: 180 RLTAEAQAERGAVLAADPSIRIMSGVLEGSNVKPVEAMTDMIANARRFEMQMKVITSVDE 239
           RL      + G  +  D ++R++SG LE SNV  V  MT ++A +R+FE+ +K++ + ++
Sbjct: 181 RL------KDGQPVEPDANVRVVSGFLEASNVNAVSEMTSILALSRQFELHVKMMRTAED 234

Query: 240 NEGRANQLLSMS 251
           +     ++L +S
Sbjct: 235 DAAAMARVLQLS 246