Pairwise Alignments

Query, 251 a.a., Flagellar basal-body rod protein FlgF from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 247 a.a., flagellar basal body rod protein FlgF (RefSeq) from Shewanella amazonensis SB2B

 Score =  179 bits (454), Expect = 5e-50
 Identities = 101/250 (40%), Positives = 143/250 (57%), Gaps = 8/250 (3%)

Query: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVDGLSLATRTLVTAS 60
           MD  +Y AM  A Q LN  ++ A+NLANA+T GF+A L   R++   G  L TR      
Sbjct: 1   MDKFLYIAMSGAKQNLNSLSIRANNLANANTDGFKADLEQSRSMQAFGEGLPTRVFAMTE 60

Query: 61  TPGADMTPGQLDYTSRPLDVALQQDGWLVVQAADGAEGYTRNGNIQVGPTGQLT-IQGHP 119
            P A    G ++ T+R LDVA++ DGW+ V+ ADG E YTR G+++   TG LT  QG P
Sbjct: 61  NPQASFRHGPINSTARDLDVAVKGDGWIAVEDADGNEAYTRAGSLKFDETGLLTNSQGRP 120

Query: 120 VIGEGGPITVP-EGSEITIAADGTISALNPGDPPNTVAPVGRLKLVKAEGNEVQRSDDGL 178
           V+G+ GPI +P    ++ IA DGTI+    G     V  V R+KLV      + R DDGL
Sbjct: 121 VMGDAGPIVLPLPIDKVEIAQDGTITVRPQGATAEVVEEVARIKLVNPGNQNLMRGDDGL 180

Query: 179 FRLTAEAQAERGAVLAADPSIRIMSGVLEGSNVKPVEAMTDMIANARRFEMQMKVITSVD 238
           FR+        G     D ++ + S  +EGSNV PVE M  +I   R+FE+Q+K++ + +
Sbjct: 181 FRMM------NGTTAPQDETVALESRAVEGSNVNPVEEMVALIDIQRQFELQVKMMKTAE 234

Query: 239 ENEGRANQLL 248
           EN+  + QL+
Sbjct: 235 ENDKASAQLV 244