Pairwise Alignments

Query, 251 a.a., Flagellar basal-body rod protein FlgF from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 247 a.a., flagellar basal-body rod protein FlgF (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  187 bits (476), Expect = 1e-52
 Identities = 103/253 (40%), Positives = 151/253 (59%), Gaps = 8/253 (3%)

Query: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVDGLSLATRTLVTAS 60
           MD  +Y +M  A Q +N+ A+ A+NLANA+T GF++ +   R++   G  L TR      
Sbjct: 1   MDKFLYISMSGAKQNMNELALRANNLANANTDGFKSDMAQARSMQAFGEGLPTRVFAMVE 60

Query: 61  TPGADMTPGQLDYTSRPLDVALQQDGWLVVQAADGAEGYTRNGNIQVGPTGQL-TIQGHP 119
           TP A+   G +  T R LDVA++ DGW  VQA DG+E YTR+G++    TG L   +G+P
Sbjct: 61  TPSANFRSGPIKSTGRDLDVAIKGDGWFAVQAQDGSEAYTRSGSLSFDSTGLLHNDRGNP 120

Query: 120 VIGEGGPITVPEGSE-ITIAADGTISALNPGDPPNTVAPVGRLKLVKAEGNEVQRSDDGL 178
           V+G+ GPI +P   E +TI+ DG IS    G     V  VGRLKLV     ++ R +DGL
Sbjct: 121 VMGDAGPIVLPLPIEKVTISQDGIISVRPQGATTEVVEEVGRLKLVNPGNAQMMRGEDGL 180

Query: 179 FRLTAEAQAERGAVLAADPSIRIMSGVLEGSNVKPVEAMTDMIANARRFEMQMKVITSVD 238
           FRL +      G    ADPS+ + SG +EGSNV  V+ M  +I   R+FE+Q+K++ + +
Sbjct: 181 FRLVS------GDPAPADPSVSVESGAVEGSNVNSVDEMVSLIDLQRQFELQVKMMKTAE 234

Query: 239 ENEGRANQLLSMS 251
           EN+  ++ L+ +S
Sbjct: 235 ENDRASSSLMRIS 247