Pairwise Alignments

Query, 251 a.a., Flagellar basal-body rod protein FlgF from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 247 a.a., flagellar basal body rod protein FlgF (RefSeq) from Shewanella sp. ANA-3

 Score =  190 bits (482), Expect = 3e-53
 Identities = 104/253 (41%), Positives = 152/253 (60%), Gaps = 8/253 (3%)

Query: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVDGLSLATRTLVTAS 60
           MD  +Y +M  A Q +N+ A+ A+NLANA+T GF++ +   R++   G  L TR      
Sbjct: 1   MDKFLYISMSGAKQNMNELALRANNLANANTDGFKSDMAQARSMQAFGEGLPTRVFAMVE 60

Query: 61  TPGADMTPGQLDYTSRPLDVALQQDGWLVVQAADGAEGYTRNGNIQVGPTGQL-TIQGHP 119
           TP A+   G +  T R LDVA++ DGW  VQA DG+E YTR+G++    TG L   +G+P
Sbjct: 61  TPSANFRSGPIKSTGRDLDVAIKGDGWFAVQAQDGSEAYTRSGSLSFDSTGLLHNDRGNP 120

Query: 120 VIGEGGPITVPEGSE-ITIAADGTISALNPGDPPNTVAPVGRLKLVKAEGNEVQRSDDGL 178
           V+G+ GPI +P   E +TI+ DG IS    G     V  VGRLKLV     ++ R +DGL
Sbjct: 121 VMGDAGPIVLPLPIEKVTISQDGIISVRPQGATTEVVEEVGRLKLVNPGNAQMMRGEDGL 180

Query: 179 FRLTAEAQAERGAVLAADPSIRIMSGVLEGSNVKPVEAMTDMIANARRFEMQMKVITSVD 238
           FRL +      G    ADPS+ + SG +EGSNV PV+ M  +I   R+FE+Q+K++ + +
Sbjct: 181 FRLVS------GDPAPADPSVFVESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAE 234

Query: 239 ENEGRANQLLSMS 251
           EN+  ++ L+ +S
Sbjct: 235 ENDRASSSLMRIS 247