Pairwise Alignments

Query, 577 a.a., Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 684 a.a., exonuclease RecJ from Synechococcus elongatus PCC 7942

 Score =  263 bits (671), Expect = 2e-74
 Identities = 188/566 (33%), Positives = 288/566 (50%), Gaps = 35/566 (6%)

Query: 21  DLPPLLRRLYASRG---VRSARELERSVKGMLP--WQQLSGIDNAVEILYNAFREGTRII 75
           +LPP+L ++  +RG   +  AR+  +  +  LP   ++   +  +V +L  A R G RI 
Sbjct: 48  NLPPVLAQVLINRGLGAIADARDYLKPEQQELPDPREEFEDLVESVLLLEKAIRSGDRIA 107

Query: 76  VVGDFDADGATSTALSVLGMRALGCDNISYLVPNRFEDGYGLSPEVVDQAKARGAQLIVT 135
           + GD+DADG TSTAL +   R LG     Y +P+R ++GYG++  +V++  A G ++++T
Sbjct: 108 ICGDYDADGMTSTALLLRTFRQLGA-KAEYAIPSRMQEGYGINERIVEEFAASGVRVVLT 166

Query: 136 VDNGISSHAGVAHAKTLGIPVIVTDHHLPGDTLPDAEAIINPNLRDCEFPSKSLAGVGVA 195
           VDNGI+++  +A A+ LG+ VIVTDHH     LP A AI+NP L   E P   LAGVGVA
Sbjct: 167 VDNGIAAYQPIARARELGLTVIVTDHHDLPPELPPANAILNPKLLPEESPYHGLAGVGVA 226

Query: 196 FYLMLALRTFLRDKGWFDERNIAPPNLAELLDLVALGTVADVVPLDANNRILTWQGLSRI 255
           + L L +          ++ N     +  LL+L  LGT+AD+ PL   NR    +GL R+
Sbjct: 227 YVLALCVA---------EQFNRQAELIRPLLELYTLGTIADLAPLTGVNRRWLQRGL-RL 276

Query: 256 RAGKCRPGIKALLEIS--NRDPQQLAASDLGFALGPRLNAAGRLDDMSVGVALLLCDNLG 313
                  G++AL+E +      + L   D+GF LGPR+NA GR+ D  V + LL  ++  
Sbjct: 277 LPQSQLVGVQALMEAAGVKTSDRSLKPEDIGFKLGPRINAIGRIGDPQVVIELLTTEDRD 336

Query: 314 EARVLASELDALNQTRKEIEQGMQAEALILCEKLERSSETLPGGLAMYHPEWHQGVVGIL 373
            A+ LA   +  NQ R+ +   +  EA+ + E  E         L +  P WH GV+GI+
Sbjct: 337 RAQELAGICEVTNQERRGLCDRITEEAIAIVE-AEGFDNRQTAVLVLAQPNWHHGVIGIV 395

Query: 374 ASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYPDLMIKFGGHAMAA 433
           ASR+ ER+  PV   +   DG L+GS R      +  ALE       D++ +FGGH  A 
Sbjct: 396 ASRLVERYGVPVFISSYEEDGHLRGSARGTPEFDVFAALEHC----RDVLGRFGGHRAAG 451

Query: 434 GLSLEEHKFEQFQQRFGELVTEWLDPALLQGEVISDGPLSAAEMSMEVAQLLRDAGPWGQ 493
           G SL       ++ R      + L     +  +  D  L  A  S+ + +  +   P+G 
Sbjct: 452 GFSLSAENLSAWRSRLEAFAADCLPVDCRRPAIQIDAELPIALASLNLFEQQQQLQPFGI 511

Query: 494 MFPEPLFDGR-FRLLQQRLV--GERHLKVMVEPVGGGPLLDGIAFNIDTTCWPDNGVRE- 549
              EPL+  +   +L QR +  G+ HLK+ +    G   +  + +      W D  V E 
Sbjct: 512 ANDEPLYWAKNLAILDQRRMGNGQEHLKLTLS--DGQSKVTAVYWR-----WGDRPVPED 564

Query: 550 -VELAYKLDINEFRGNRSLQIIIDDI 574
            V++AY L  N +   R LQ+ I  I
Sbjct: 565 RVDVAYYLRENIWNDRRELQLEIAGI 590