Pairwise Alignments

Query, 577 a.a., Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 584 a.a., single-stranded-DNA-specific exonuclease RecJ from Sphingomonas koreensis DSMZ 15582

 Score =  275 bits (703), Expect = 4e-78
 Identities = 193/505 (38%), Positives = 278/505 (55%), Gaps = 24/505 (4%)

Query: 25  LLRRLYASRG-VRSARELERS--VKGMLPWQQL-SGIDNAVEILYNAFREGTRIIVVGDF 80
           L+ +L  +RG  R   E  RS  ++  +P   +   +D A E L ++      + + GD+
Sbjct: 35  LVTQLLLTRGCAREELEAHRSPSIRAFMPDPSIFRDMDRAAERLADSVERREAVTIFGDY 94

Query: 81  DADGATSTALSVLGMRALGCDNISYLVPNRFEDGYGLSPEVVDQAKARGAQLIVTVDNGI 140
           D DGATS AL +  +R LG D  +Y +P+R  +GYG S E + + K  GA LIVTVD G 
Sbjct: 95  DVDGATSAALLIRLLRDLGLDPRAY-IPDRLMEGYGPSGEALVRLKREGADLIVTVDCGA 153

Query: 141 SSHAGVAHAKTLGIPVIVTDHHLPGDTLPDAEAIINPNLRDCEFPSK--SLAGVGVAFYL 198
            +   +A A+  G  VIV DHH     LP A A++NPN  D +   +   LA VGVA+ L
Sbjct: 154 MAFDALAEARDAGAEVIVVDHHKCASELPVALALVNPNRLDEDEGRQHGHLAAVGVAWLL 213

Query: 199 MLALRTFLRDKGWFDERNIAPPNLAELLDLVALGTVADVVPLDANNRILTWQGLSRIRAG 258
             AL   LR +G+F  R  A P L +LLD+VALGTVADV  L   NR    QGL ++ A 
Sbjct: 214 GAALVRVLRGRGFFANR--AEPKLLDLLDIVALGTVADVAALKGLNRAFVAQGL-KVMAQ 270

Query: 259 KCRPGIKALLEISNRDPQQLAASDLGFALGPRLNAAGRLDDMSVGVALLLCDNLGEARVL 318
           +   G+ AL+E S R  +   A+DLGFALGPR+NA GR+    +GV LL  ++  EAR +
Sbjct: 271 RRNTGMNALIEAS-RLTRAPTATDLGFALGPRINAGGRVGKSDLGVRLLTTEDADEARGI 329

Query: 319 ASELDALNQTRKEIEQGMQAEALILCEKLERSSETLPGGLAMYHPE-WHQGVVGILASRI 377
           A EL+ LN+ R+ IE  +Q  A    E +E       G +A+     WH GV+GI+A R+
Sbjct: 330 AEELNRLNEERRAIEAEVQQSA----EAIEAE-----GAVAVVAARGWHPGVIGIVAGRL 380

Query: 378 KERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYPDLMIKFGGHAMAAGLSL 437
           KER  RP I  A   DG  KGSGRSI G+ +  A+  L      L+I  GGHAMAAG+++
Sbjct: 381 KERLGRPAIVIAIGEDGIGKGSGRSIAGVDLGAAI--LAAKEAGLLIAGGGHAMAAGVTI 438

Query: 438 EEHKFEQFQQRFGELVTEWLDPALLQGEVISDGPLSAAEMSMEVAQLLRDAGPWGQMFPE 497
            E +         E + E ++ A  +  ++ D  L+   ++  +   +   GP+G  +P 
Sbjct: 439 AEDQIPALVAFLDEKLAETVERAAGERALLLDAVLAPGGVNPALVNAMEAGGPYGMGWPA 498

Query: 498 P-LFDGRFRLLQQRLVGERHLKVMV 521
           P +  G  R+++  +VG  H++ +V
Sbjct: 499 PRVAAGPVRIIKCDVVGNGHVRAIV 523