Pairwise Alignments

Query, 577 a.a., Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 564 a.a., single-stranded-DNA-specific exonuclease RecJ from Ralstonia sp. UNC404CL21Col

 Score =  488 bits (1255), Expect = e-142
 Identities = 268/549 (48%), Positives = 352/549 (64%), Gaps = 11/549 (2%)

Query: 24  PLLRRLYASRGVRSARELERSVKGMLPWQQLSGIDNAVEILYNAFREGTRIIVVGDFDAD 83
           P+L R+ A+RGV    EL   +  +LP  QL GID+A   L +A     R++++ D+D D
Sbjct: 24  PVLARILAARGVARPDELSTELTDLLPPTQLKGIDDAARYLADAIAANKRMLIIADYDCD 83

Query: 84  GATSTALSVLGMRALGCDNISYLVPNRFEDGYGLSPEVVDQAKARGAQLIVTVDNGISSH 143
           GAT+ A+ V G+R LG   +SY+VPNRFE GYGLSPE+V  A      ++VTVDNGI+  
Sbjct: 84  GATACAVGVRGLRMLGAQ-VSYIVPNRFEYGYGLSPEIVALAAREKPDVLVTVDNGIADV 142

Query: 144 AGVAHAKTLGIPVIVTDHHLPGDTLPDAEAIINPNLRDCEFPSKSLAGVGVAFYLMLALR 203
           AGVA A  L I V+VTDHH+PG  LP A  I+NPN   C FPSK+LAGVGV FY++LALR
Sbjct: 143 AGVAAANALSIDVVVTDHHMPGAQLPAARVIVNPNQPGCGFPSKNLAGVGVMFYVLLALR 202

Query: 204 TFLRDKGWFDERNIAPPNLAELLDLVALGTVADVVPLDANNRILTWQGLSRIRAGKCRPG 263
             LR +G F  ++   P L  LLDLVALGTVADVV LDANNR+L  QGL R+RAG+  PG
Sbjct: 203 AELRKRGVFTPQD--QPRLDALLDLVALGTVADVVKLDANNRLLVAQGLKRMRAGRMCPG 260

Query: 264 IKALLEISNRDPQQLAASDLGFALGPRLNAAGRLDDMSVGVALLLCDNLGEARVLASELD 323
           I AL  ++ R+ ++ +  DLGF LGPRLNAAGRL DMS+G+  LL D+   A  +A+ELD
Sbjct: 261 IAALFRVAGREARRASTFDLGFGLGPRLNAAGRLADMSLGIECLLTDDYDRAMSIAAELD 320

Query: 324 ALNQTRKEIEQGMQAEALILCEKLERSSETLPGGLAMYHPEWHQGVVGILASRIKERFHR 383
            +N+ R+EIE GMQ EAL + + +          +A+Y+  WHQGV+GI+ASRIK++FHR
Sbjct: 321 GMNRERREIEAGMQQEALAILDSMNAFDGAGRHTIAVYNETWHQGVIGIVASRIKDKFHR 380

Query: 384 PVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYPDLMIKFGGHAMAAGLSLEEHKFE 443
           PV  FAP  DG +KGSGRSI G H+RDAL+ +    P L++KFGGHAMAAGL+L E  FE
Sbjct: 381 PVFTFAPGDDGVIKGSGRSIPGFHLRDALDAVHKRSPGLIVKFGGHAMAAGLTLREDGFE 440

Query: 444 QFQQRFGELVTEWLDPALLQGEVISDGPLSAAEMSMEVAQLLRDAGPWGQMFPEPLFDGR 503
            F   F  +  EWL  ALL   + +DG       + +  +LL +   WGQ FP P F G 
Sbjct: 441 TFVATFEAVGREWLTEALLSRVLETDGEADPECFTPQFVELL-ETQVWGQGFPAPSFCGE 499

Query: 504 FRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNIDTTCWPDNGVREVELAYKLDINEFRG 563
           F +L Q ++ E+HLK+ +    G    D I FN       +       +AY+LD N F G
Sbjct: 500 FDVLSQAVLKEKHLKLKLG--RGKQHFDAIWFN-----HAEPLGASAYVAYRLDNNTFNG 552

Query: 564 NRSLQIIID 572
              +Q++I+
Sbjct: 553 ITRVQMVIE 561