Pairwise Alignments

Query, 250 a.a., Uncharacterized lipoprotein YgeR precursor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 311 a.a., murein hydrolase activator NlpD from Vibrio cholerae E7946 ATCC 55056

 Score =  191 bits (484), Expect = 2e-53
 Identities = 112/271 (41%), Positives = 141/271 (52%), Gaps = 61/271 (22%)

Query: 33  GTYSGSVYTVKRGDTLYRISRATGTSVKELARLNGISPPYTIEVGQRIKV---------- 82
           G+Y GS Y VK+GDTLY I+  T   V +L   N ++PPYTI  GQ+IK+          
Sbjct: 41  GSYRGSYYEVKKGDTLYFIAYLTDKDVNDLISYNDLAPPYTIHPGQKIKLWLPNYTPPAY 100

Query: 83  --RGSAKSSTSTRKTSNKTATKTAAVRPSSSVPKSS------------------------ 116
              G A +      TS   A        + +V KSS                        
Sbjct: 101 GGTGGAATVAVASSTSASVAKAATTATVAQTVSKSSNTKNVQNGSTNSQNLTKKDPVKTV 160

Query: 117 --------WPPVGQRC-----------------WVWPANGKVILPYSTAEGGNKGIDIAG 151
                     PVG++                  W+WP  G+VI  +S  + GNKGIDIAG
Sbjct: 161 DQTKTKEYVEPVGKQNVNVNVAKAKPSDEKIAKWLWPTKGRVIKNFSAGDQGNKGIDIAG 220

Query: 152 ARGTPVYAAGAGKVVYVGNQLRGYGNLIMIKHNEDYITAYAHNDTMLVNNGQSVKAGQKI 211
            RG  V A   G VVY GN LRGYGNLI+IKHNE Y++AYAHND +L   GQ+V+AGQKI
Sbjct: 221 QRGQAVVATADGTVVYSGNALRGYGNLIIIKHNEHYLSAYAHNDQLLAKEGQTVQAGQKI 280

Query: 212 ATMGSTDAASVRLHFQIRYRATAIDPLRYLP 242
           ATMGS+   SVRLHF+IRY+  +++P RYLP
Sbjct: 281 ATMGSSGTNSVRLHFEIRYQGKSVNPKRYLP 311