Pairwise Alignments

Query, 286 a.a., Integral membrane protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 284 a.a., Protein of unknown function DUF6, transmembrane (NCBI) from Rhodospirillum rubrum S1H

 Score =  199 bits (507), Expect = 4e-56
 Identities = 117/280 (41%), Positives = 166/280 (59%), Gaps = 7/280 (2%)

Query: 14  VFCILLFAALLHASWNAIVKAGNDKLYAAIGVSGSAAVMALILLPFSPQPAHASIPFLAA 73
           VF ++L AA +HA WNA+VK G D   A + +S +A V++L+ LPF P P  AS PFLA 
Sbjct: 5   VFALVLGAAAMHAGWNAVVKVGLDGFSAVMLISMAAGVLSLLGLPFVPFPEPASWPFLAL 64

Query: 74  STALQVVYTVLVAKTYQVSDMSQTYPLMRGTAPLLVALISVLFLGDSLSSLAWVGIAVIC 133
           S  L + Y V +   Y+  D  Q YP+ RG APL+VA++S L L +    +A +GIA++ 
Sbjct: 65  SGCLHMGYNVALIGAYRAGDFGQIYPIARGAAPLMVAVLSALLLDEPPGLVAALGIALLV 124

Query: 134 MAILGMACNGRA-------SSQRGVVLALTNACFIAGYTLVDGTGVRLSETALGYTLWSF 186
             +  M+  G A         +R ++ AL  +CFIA YTL DG G R + +A  Y LW F
Sbjct: 125 GGVWLMSIRGGAVGRSGGLPERRALLAALMTSCFIAAYTLSDGLGGRAAGSAHAYALWLF 184

Query: 187 FLNGACLLTWAMIARRREASRYLAQQWKKGIFGGIGTMGSYGLALWAMTQAPLAVVAALR 246
            L+G   L   ++ R R   + +A+    GI GG  ++G+Y   +WAM+ APL  VAALR
Sbjct: 185 ALDGVLALLVTVVLRGRAIFKGMARALPAGIGGGALSLGAYWTVIWAMSVAPLGQVAALR 244

Query: 247 ETSILFGALIAWLLLKEKVAGLRLVAAGGIALGAILLRLS 286
           E+S+LF  LI+ + L EK +  RL AA  IA GA ++RL+
Sbjct: 245 ESSVLFALLISVVFLGEKASRWRLGAAALIACGAGVIRLA 284