Pairwise Alignments

Query, 286 a.a., Integral membrane protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 299 a.a., Protein of unknown function DUF6, transmembrane (NCBI) from Rhodospirillum rubrum S1H

 Score =  113 bits (283), Expect = 4e-30
 Identities = 94/283 (33%), Positives = 145/283 (51%), Gaps = 22/283 (7%)

Query: 17  ILLFAALLHASWNAIVK----AGNDKLYAAIGVSGSA-AVMALILLPFSPQPAHASIP-F 70
           +++ AA++HASWN + K    AG   ++A    +  A A  AL L+        AS+   
Sbjct: 17  LVVLAAVIHASWNLLSKRAASAGPTFVFAYTFTACLAYAPWALWLIAQGAVAWSASVVGC 76

Query: 71  LAASTALQVVYTVLVAKTYQVSDMSQTYPLMRGTAPLLVALISVLFLGDSLSSLAWVGIA 130
           L  S  + + Y++ + + YQV+D+S  YP+ RGT PLL  L +++FLG+  S     G+ 
Sbjct: 77  LLISGIVHLGYSLCLQRGYQVADLSVVYPVARGTGPLLAVLAAIVFLGEQPSLRGVFGLI 136

Query: 131 VICMAILGMACNGRASSQR------GVVLALTNACFIAGYTLVDGTGVRLSETALGYTLW 184
            +   I  ++  GR ++ R      GV+  L     IA YT+VD  GV      +   + 
Sbjct: 137 AVVGGIALISTQGRLAAFRKPGGSSGVLWGLATGGLIASYTVVDAYGV--MTLGIAPVVL 194

Query: 185 SFFLNGA--CLLTWAMIARRREASRYLAQQWKKGIFGGIGTMGSYGLALWAM-TQAPLAV 241
            +F NGA   LL   + A  R A   +A +W   I  G+ +  SY L L A+   APL++
Sbjct: 195 DWFANGARVVLLAPLIAANPRRAREAMAGKWPLAIGVGLLSPLSYILVLAALDIGAPLSI 254

Query: 242 VAALRETSILFGALIAWLLLKEKV-----AGLRLVAAGGIALG 279
            A LRE S++ GAL+  +LLKE+V      G  ++  G +ALG
Sbjct: 255 AAPLREMSMMVGALLGMVLLKERVGAWRFGGCAVLLCGVVALG 297