Pairwise Alignments

Query, 296 a.a., Peptide transport system permease protein SapC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 296 a.a., peptide ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  291 bits (746), Expect = 9e-84
 Identities = 147/291 (50%), Positives = 197/291 (67%)

Query: 1   MPYDSVYSEKRPPGTLRTAWRKFYSDAPAMVGLYGCAGLALLCIFGGWIAPYGIDQQFLG 60
           MP   +Y E +    +   W+ F ++  A+ GL+  A L LL +FG  IAP+  + Q   
Sbjct: 1   MPPVKIYQEDQIASPMMRVWQNFSANPFALAGLWTIAFLLLLTLFGPLIAPFAPEAQDPR 60

Query: 61  YQLLPPSWSRYGEVSFFLGTDDLGRDVLSRLLSGAAPTVGGAFIVTLAATLCGLVLGVVA 120
             LLPPSW   G VS FLGTDDLGRD+ SRLL GA  T G A ++   A   G ++G ++
Sbjct: 61  ALLLPPSWDPSGTVSHFLGTDDLGRDIFSRLLHGAHLTFGMALMIVGTALFTGFIIGSLS 120

Query: 121 GATHGLRSAVLNHILDTLLSIPSLLLAIIVVAFAGPHLSHAMFAVWLALLPRMVRSVYSM 180
           G   GL+S++L H+LD LLSIPSLL+AI+VVA  GP L +  +AV +AL P+ VRS++  
Sbjct: 121 GMMRGLKSSILGHLLDALLSIPSLLMAILVVAVMGPGLENVFWAVGIALTPQFVRSIHQS 180

Query: 181 VHDELEKEYVIAARLDGATTLNILWFAILPNITAGLVTEITRALSMAILDIAALGFLDLG 240
           VH+EL+KEYV AARLDGA ++ I W+ I+PN+   ++ + T A+S AILDIAALGFL LG
Sbjct: 181 VHEELQKEYVTAARLDGANSIQIFWYVIMPNVWEVVIIQTTLAISAAILDIAALGFLSLG 240

Query: 241 AQLPSPEWGAMLGDALELIYVAPWTVMLPGAAITLSVLLVNLLGDGIRRAI 291
           AQ PSPEWGAM+   ++ +  APWTV +PG AI  SVL +NL+GDG+R A+
Sbjct: 241 AQAPSPEWGAMVAQGMDNLLTAPWTVTIPGLAILFSVLAINLVGDGLRSAL 291