Pairwise Alignments

Query, 321 a.a., Peptide transport system permease protein SapB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 350 a.a., ABC transporter permease from Pantoea sp. MT58

 Score =  196 bits (498), Expect = 7e-55
 Identities = 116/329 (35%), Positives = 175/329 (53%), Gaps = 26/329 (7%)

Query: 6   LRRLLLLLVTLFFLTFIGFSLSYFTPHAPLQGASLWNA-------------------WVF 46
           L  +L LLVTL  L    F LS+ +P  P+Q  +  +A                     F
Sbjct: 22  LGSVLSLLVTLLGLLAFTFMLSHLSPIDPVQQIAGDHASEATYAQVRHDLGLDEPVLMQF 81

Query: 47  W--FNGLLHWDFGVSSINGQLISEQLKEVFPATMELCILAFGFALMVGIPVGMLAGVTRS 104
           W     L H D GVS +  Q +S  L   FPAT+EL   A  FA++ G+ + +LA     
Sbjct: 82  WRYVEHLAHGDLGVSRLTNQSVSGDLMSTFPATIELATCAMIFAVVFGVALALLAAWKPG 141

Query: 105 KWPDRFISALALLGFSIPVFWLALLLTLFFSLTLGWLPVSGRFD--LLYEVKPVTGFAII 162
            W D     ++LLG+S+PVFWL LL  L F   L W    GR D   +Y ++P TGF +I
Sbjct: 142 SWIDNLARFISLLGYSVPVFWLGLLGLLLFYAVLHWSAGPGRLDDIWVYTLEPKTGFVLI 201

Query: 163 DAWISDSPWRDEMVMSAIRHMVLPVLTLSVAPTTEVIRLMRISTIEVYDQNYVKAAATRG 222
           D+W+S  P   EM  +AI H+ LPV+ L +     + RL+R + +E   + YV  A  +G
Sbjct: 202 DSWLSGEP---EMFRNAIAHLWLPVVILGLLAMAGITRLLRAALLEESSKEYVVLARAKG 258

Query: 223 LSRFTILRRHVLHNALPPVIPRLGLQFSTMLTLAMITEMVFSWPGLGRWLIHAIRQQDYA 282
             R  IL RH+  N L  ++  + L ++T+L  +++TE VF+WPG+GR++ +A+   D  
Sbjct: 259 AGRVRILLRHIFPNVLGTLVTVIALSYATLLEGSVLTETVFAWPGVGRYMTNALFSGDVP 318

Query: 283 AISAGVMVIGSLVIVVNVISDILGAMANP 311
           AI    ++IGS  I++N ++D+L  + +P
Sbjct: 319 AILGSTLLIGSCFILINTLADVLTWLTDP 347