Pairwise Alignments

Query, 162 a.a., Transcriptional activator RfaH from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 167 a.a., antitermination protein NusG from Pedobacter sp. GW460-11-11-14-LB5

 Score = 56.2 bits (134), Expect = 3e-13
 Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 7/144 (4%)

Query: 4   WYLLYCKRGQLQRAQEHLERQAVSCLTPMITLEKMVRGKRTSVSEPLFPNYLFVEFDPEV 63
           WY +Y +    ++A E L R+ +    P+    K    ++  V EPL  +YLF       
Sbjct: 8   WYPVYTRSRAEKKANEELNRKGIQTYLPLKKAVKQWSDRKKIVEEPLIKSYLFAYISAR- 66

Query: 64  IHTTTINATRGVSHFVRFGAHPAIVPSSVIHQLSIYKPEG----VVDPETPYPGDSVIIT 119
                +  T GV+ F+ F +  A +P   IH L +         ++D +   PG+ V+I 
Sbjct: 67  -EYAEVLMTNGVARFIYFSSQIASIPDQQIHDLKLLLATDADLELIDYDIK-PGERVLIK 124

Query: 120 EGAFEGLKAIFTEPDGETRSMLLL 143
            G F+G+ A       + R +L L
Sbjct: 125 AGPFKGVIAELVSVHNKQRIILRL 148