Pairwise Alignments

Query, 615 a.a., ATP-dependent DNA helicase RecQ from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 708 a.a., DNA helicase RecQ from Pseudomonas fluorescens SBW25-INTG

 Score =  553 bits (1425), Expect = e-162
 Identities = 283/600 (47%), Positives = 400/600 (66%), Gaps = 4/600 (0%)

Query: 19  AKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTVVVS 78
           A++VL++ FGY  FR  Q AII+   SG D LV+MPTGGGKSLC+Q+PALL +GL VVVS
Sbjct: 5   AQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLAVVVS 64

Query: 79  PLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQIRLLYIAPERLMLDNFL 138
           PLI+LM DQV  L   GVAAA LNST S EQQ ++ A  + G++++LY+APERL+    L
Sbjct: 65  PLIALMDDQVATLEELGVAAASLNSTLSAEQQRDLAARIKRGEVKMLYLAPERLVQPRML 124

Query: 139 DHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTATADDTTRQDI 198
             L      L A+DEAHC+SQWGHDFR EY  LGQL + FP +P +ALTATAD  TR++I
Sbjct: 125 AFLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRTREEI 184

Query: 199 IRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDT 258
           +  L L +    +SSFDRPNI Y ++ K +P  QL+ ++ E+R  +GI+YC SR KV++ 
Sbjct: 185 VERLHLQNAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLSERRSDAGIVYCLSRKKVDEV 244

Query: 259 AARLQSRGISAAAYHAGLENAIRVDVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFD 318
           AA L  +G  A  YHAGL N  R   Q++F  ++  I+VAT+AFGMGI+K NVRFV H D
Sbjct: 245 AAFLCEQGYPALPYHAGLPNETRSAHQKRFLNEEGLIMVATIAFGMGIDKSNVRFVAHMD 304

Query: 319 IPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGQL-QDIERHKLNAM 377
           +P+++E+YYQETGRAGRDGLPA+A + Y   D+  L++ L+     +  + +E+HKL+AM
Sbjct: 305 LPKSLEAYYQETGRAGRDGLPADAWMVYGLQDVVMLKQMLQNSEGDERHKRLEQHKLDAM 364

Query: 378 GAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGLNDAQIALSTIGRVNQRFG 437
            +  E   CRR  LL YF E   +PCG+CD C+D  + +D    A+  LS I R  QR+G
Sbjct: 365 LSLCEETRCRRQTLLAYFDEDMPQPCGHCDNCVDGVQTWDATEPARQGLSAIYRTGQRYG 424

Query: 438 MGYVVEVIRGANNQRIRDFGHDKLKVYGMGREKSHEHWVSVIRQLIHLGLVMQNIAQHSA 497
           +G++V+V+ G +N+++R FGH+KL VYG+G+ ++   W S+ RQ++  GLV  +I  +  
Sbjct: 425 VGHLVDVLLGKDNEKVRSFGHEKLSVYGVGKARAEGEWRSLFRQMVARGLVDIDIEGYGG 484

Query: 498 LQLTDAARPVLRGDVPLKL---AVPRIVALKPRVMQKSFGGNYDRKLFAKLRKLRKAIAD 554
           L+L D+ RP+L+G+V L+L     P+  A              +R+ +  LR LR+ +A 
Sbjct: 485 LRLNDSCRPLLKGEVSLELRRDLKPQTTAKSSTSQASQLVRGEEREQWEALRTLRRKLAQ 544

Query: 555 EENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKEFMALIRAHVDGDDE 614
           E ++PPYV+F D+TL+EM  + P S +EM  V+GVG RKLER+G+ F+ ++    +   E
Sbjct: 545 EHSVPPYVIFPDSTLLEMLREQPTSMAEMARVSGVGARKLERYGQAFLEVLGGQAEAPKE 604