Pairwise Alignments

Query, 388 a.a., Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 373 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  552 bits (1423), Expect = e-162
 Identities = 267/368 (72%), Positives = 313/368 (85%), Gaps = 1/368 (0%)

Query: 19  ETKINLLDLNRQQMREFFKNLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV 78
           E KINLLDL+   ++     +GEKPFRA Q+M+W+YH+   +F++MT+INK +R KL   
Sbjct: 3   EKKINLLDLDLPGLKALLTEMGEKPFRAQQIMQWIYHFGVSDFEQMTNINKAMRAKLAAR 62

Query: 79  AEIRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCS 137
            EI APE+   Q+SSDGTIK+AI VG  Q VETVYIPEDDRATLCVSSQVGCALEC FCS
Sbjct: 63  CEIVAPEITSYQKSSDGTIKFAINVGQGQEVETVYIPEDDRATLCVSSQVGCALECTFCS 122

Query: 138 TAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLTNVVPAME 197
           TAQQGFNRNL VSEI+GQ+WR +  +G  K TG+RPI+NVVMMGMGEPLLNL NVVPAM 
Sbjct: 123 TAQQGFNRNLTVSEIVGQIWRVSHFLGFQKETGERPISNVVMMGMGEPLLNLANVVPAMN 182

Query: 198 IMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDTIRDEIVPINKKYN 257
           IMLDD+GFGLSKRRVTLSTSGVVPALDKLGD+IDVALA+S+HAPND +RD +VPINKKY 
Sbjct: 183 IMLDDYGFGLSKRRVTLSTSGVVPALDKLGDVIDVALAVSIHAPNDELRDVLVPINKKYP 242

Query: 258 IETFLGAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKETPCKINLIPWNP 317
           ++ FL A+RRYLEKSNAN+GRVT+EYVMLDH+ND T+ AH+LA+L+K+TPCKINLIP+NP
Sbjct: 243 LQEFLAAIRRYLEKSNANRGRVTLEYVMLDHINDSTDQAHELAKLMKDTPCKINLIPFNP 302

Query: 318 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKR 377
           +PG+PYGRSSNSRIDRF+KVLM Y  T IVRKTRGDDIDAACGQLAGD+ DRTKR  +KR
Sbjct: 303 YPGSPYGRSSNSRIDRFAKVLMEYDLTVIVRKTRGDDIDAACGQLAGDIRDRTKRLAKKR 362

Query: 378 MQGEVIDI 385
           MQ   I +
Sbjct: 363 MQESQISV 370