Pairwise Alignments

Query, 388 a.a., Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 399 a.a., 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN from Rhodopseudomonas palustris CGA009

 Score =  301 bits (772), Expect = 2e-86
 Identities = 177/372 (47%), Positives = 231/372 (62%), Gaps = 20/372 (5%)

Query: 21  KINLLDLNRQQMREFFKNLGEKP----FRADQVMKWMYHYCCDNFDEMTDINKVLRGKLK 76
           K +L+ L+R Q+ +   ++G  P     RA Q+  WMY     +F EMT+++K +R  L 
Sbjct: 23  KPSLIGLSRAQLCDRLGDVGVAPPQRKMRAQQLWHWMYVRGARDFSEMTNVSKEMRAMLA 82

Query: 77  EVAEIRAPEVVEEQRSSDGTIKWAIAV---GD----QRVETVYIPEDDRATLCVSSQVGC 129
           E   +  PEVV EQ S+DGT KW + +   GD      VE VYIPE DR TLCVSSQVGC
Sbjct: 83  EHFTVDRPEVVAEQISADGTRKWLLRLPSGGDGQKAHEVECVYIPETDRGTLCVSSQVGC 142

Query: 130 ALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVG----AAKVTGQRPITNVVMMGMGEP 185
            L C FC T  Q   RNL   EI+GQV  A   +G         G R ITN+VMMGMGEP
Sbjct: 143 TLNCAFCHTGTQRLVRNLTAGEIVGQVMVARDRLGDWIDRETPNGNRLITNIVMMGMGEP 202

Query: 186 LLNLTNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDTI 245
           L N   V  A+ I+ D+ G G+S+RR+TLSTSGVVP + + GD I V LAISLHA  D +
Sbjct: 203 LYNFDAVRDALLIVSDNEGIGISRRRITLSTSGVVPNIKRTGDEIGVMLAISLHAVRDEL 262

Query: 246 RDEIVPINKKYNIETFLGAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKE 305
           RDE+VP+N+KY ++  L A R Y   SNA   R+T EYVML  VND  + A +L +LLK 
Sbjct: 263 RDELVPLNRKYPLKELLQACRDYPGASNAR--RITFEYVMLKGVNDSLDDARKLVQLLKG 320

Query: 306 TPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 365
            P KINLIP+NP+PG+ Y  S   +I++FS+ + + G+++ VR  RG DI AACGQL  +
Sbjct: 321 IPAKINLIPFNPWPGSNYECSDWDQIEKFSEYVFNAGYSSPVRTPRGRDILAACGQLKSE 380

Query: 366 VIDRTKRTLRKR 377
                K ++R+R
Sbjct: 381 T---EKLSVRER 389