Pairwise Alignments

Query, 388 a.a., Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 373 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  555 bits (1430), Expect = e-163
 Identities = 267/368 (72%), Positives = 317/368 (86%), Gaps = 1/368 (0%)

Query: 19  ETKINLLDLNRQQMREFFKNLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV 78
           E KINLLDL+R+ +R  F  +GEKPFRADQ+MKW+YH+   +F++MT+INKVLR KL   
Sbjct: 3   EKKINLLDLDRKGLRALFTEMGEKPFRADQLMKWLYHFGVSDFEQMTNINKVLRAKLAAR 62

Query: 79  AEIRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCS 137
            E+ APE+   Q+S+DGTIK+AI VG+ Q VETVYIPE+DRATLCVSSQVGCALEC FCS
Sbjct: 63  CEVVAPEISSYQKSADGTIKFAINVGNGQEVETVYIPEEDRATLCVSSQVGCALECTFCS 122

Query: 138 TAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLTNVVPAME 197
           TAQQGFNRNL VSEI+GQ+WR +  +G  K TG+RPI+NVVMMGMGEPLLNL NV+PA++
Sbjct: 123 TAQQGFNRNLTVSEIVGQIWRVSHFLGFQKETGERPISNVVMMGMGEPLLNLKNVMPAID 182

Query: 198 IMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDTIRDEIVPINKKYN 257
           IMLDDFGF LSKRRVT+STSGVVPALD LGD +DVALA+S+HAPND +RD +VP+NKKY 
Sbjct: 183 IMLDDFGFSLSKRRVTVSTSGVVPALDILGDNLDVALAVSIHAPNDELRDVLVPVNKKYP 242

Query: 258 IETFLGAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKETPCKINLIPWNP 317
           ++ FL A+RRYL KSNAN+GRVT+EYVMLDH+ND T+ AH+LAEL+K+TPCKINLIP+NP
Sbjct: 243 LQEFLAAIRRYLAKSNANRGRVTLEYVMLDHINDSTDQAHELAELMKDTPCKINLIPFNP 302

Query: 318 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKR 377
           +PG+PYGRSSNSRIDRFSKVLM YG T IVRKTRGDDIDAACGQLAGD+ DRTKR  +KR
Sbjct: 303 YPGSPYGRSSNSRIDRFSKVLMEYGLTVIVRKTRGDDIDAACGQLAGDIRDRTKRLAKKR 362

Query: 378 MQGEVIDI 385
           MQ   I +
Sbjct: 363 MQDSQISV 370