Pairwise Alignments

Query, 388 a.a., Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 367 a.a., radical SAM enzyme, Cfr family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  259 bits (663), Expect = 7e-74
 Identities = 147/349 (42%), Positives = 210/349 (60%), Gaps = 13/349 (3%)

Query: 22  INLLDLNRQQMREFFKN-LGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 80
           I++L+L   ++  +    LGE  FRA QV +W++     +FD MT+++K  R +L E A 
Sbjct: 2   IDILNLTYDELEAWMTGTLGEPRFRARQVWQWLWQKNARSFDAMTNVSKATRARLAEAAR 61

Query: 81  IRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRA-----TLCVSSQVGCALECK 134
           I  PEV   + SSDGT+K+ +A+ D   VETV IP + R      T C+S QVGCA+ C 
Sbjct: 62  ITWPEVRTVKTSSDGTVKFLLALADGALVETVLIPSESREGKVRMTQCLSCQVGCAMGCT 121

Query: 135 FCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPIT-NVVMMGMGEPLLNLTNVV 193
           FCST   GF RN+ ++EI+GQV  A + +G  +     PI  N+V MGMGEPLLNL  V+
Sbjct: 122 FCSTGSMGFERNMTMAEILGQVLVAREHLGDDRP--DHPIVRNLVFMGMGEPLLNLNEVM 179

Query: 194 PAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDTIRDEIVPIN 253
            ++  + D+FG   S RR+T+ST G+   L +LG+     LA+SLHAPN  +R  I+P  
Sbjct: 180 RSLRTLNDEFGLCFSPRRITVSTCGIEKGLRELGESGLAFLAVSLHAPNQEVRARIMPRA 239

Query: 254 KKYNIETFLGAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKETPCKINLI 313
            ++ ++  + A+  Y  K+     R+T EY++L  VND  +HA +L  L+  T  K+NLI
Sbjct: 240 ARWTLDDLMAALESYPLKTRE---RITFEYLLLGGVNDSIDHARELVRLVSRTKAKLNLI 296

Query: 314 PWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 362
            +NP  G PY   S +RI  F + L S   T I+RK++G DI AACGQL
Sbjct: 297 VYNPAEGLPYEAPSQARILAFEQYLWSKNVTAIIRKSKGQDIKAACGQL 345