Pairwise Alignments

Query, 388 a.a., Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 378 a.a., 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN from Dyella japonica UNC79MFTsu3.2

 Score =  405 bits (1041), Expect = e-117
 Identities = 210/369 (56%), Positives = 266/369 (72%), Gaps = 10/369 (2%)

Query: 15  VPNKETKINLLDLNRQQMREFFKNLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGK 74
           +P+ E K+NLLD +RQ +R+FF  LGEKP+RA+QVMKW+YH   DNF+ MTD+ K LR K
Sbjct: 7   IPSAE-KVNLLDFDRQGLRDFFARLGEKPYRAEQVMKWIYHRLEDNFENMTDVGKALRTK 65

Query: 75  LKEVAEIRAPEVVEEQRSSDGTIKWAIAV-GDQRVETVYIPEDDRATLCVSSQVGCALEC 133
           L+    I  P+ + ++ ++DGT KW + + G   VE VYIPE  R TLCVSSQVGC L C
Sbjct: 66  LEASCYIGPPKTMFDKGAADGTHKWLLGMDGGNAVEAVYIPEPTRGTLCVSSQVGCGLNC 125

Query: 134 KFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQ-RPITNVVMMGMGEPLLNLTNV 192
           +FCSTA QGFNRNL  SEIIGQ+W AAK +G   VT Q R ITNVVMMGMGEPLLN  NV
Sbjct: 126 QFCSTATQGFNRNLATSEIIGQMWVAAKYLG--NVTHQNRRITNVVMMGMGEPLLNFDNV 183

Query: 193 VPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDTIRDEIVPI 252
           V AM +M DD GFGL+ +RVTLST+G+VP +DKL + IDV+LA+SLHA ND +R E+VP+
Sbjct: 184 VKAMSLMRDDLGFGLASKRVTLSTAGMVPMIDKLSEAIDVSLAVSLHAANDELRTELVPL 243

Query: 253 NKKYNIETFLGAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKETP-CKIN 311
           NK+Y IE  LGA +R+LE+       +T EY ++  VND  EHA QL +L++  P CK+N
Sbjct: 244 NKRYPIEELLGACKRWLERKPRTS--ITFEYTLMKGVNDQPEHARQLIKLMRRLPNCKVN 301

Query: 312 LIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 371
           LIP+NPFPG  + RS    I  F   L++    T++R+TRGDDIDAACGQL G V+DRT+
Sbjct: 302 LIPFNPFPGTRFERSDADTIRAFQTQLLNANILTMLRRTRGDDIDAACGQLKGQVLDRTR 361

Query: 372 R--TLRKRM 378
           R    RKR+
Sbjct: 362 RQAEFRKRL 370