Pairwise Alignments

Query, 388 a.a., Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 364 a.a., radical SAM enzyme, Cfr family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  266 bits (680), Expect = 7e-76
 Identities = 152/358 (42%), Positives = 211/358 (58%), Gaps = 19/358 (5%)

Query: 23  NLLDLNRQQMREFFK-NLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 81
           ++L+L  +++  F    LGE  FRA QV +W++  C  +FDEMT+++K  R +L E A I
Sbjct: 3   DILNLTYEELEAFMTAELGEPRFRARQVWQWLWQKCARSFDEMTNVSKATRARLAEKAVI 62

Query: 82  RAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRA-----TLCVSSQVGCALECKF 135
             PEV   Q+S+DGT K+ + + D   VETV IP   R      T C+S QVGCA+ C F
Sbjct: 63  TWPEVETVQKSADGTTKFLLRLADGALVETVLIPSASREGTLRITQCLSCQVGCAMGCTF 122

Query: 136 CSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRP----ITNVVMMGMGEPLLNLTN 191
           CST   GF RN+ + EI+GQV     +V  A +   RP    + N+V MGMGEPLLNL  
Sbjct: 123 CSTGTMGFERNMTMGEILGQV-----LVARAHLGDSRPDHPILRNLVFMGMGEPLLNLNE 177

Query: 192 VVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDTIRDEIVP 251
           V+ ++  + D+FG   S RR+T+ST G+   L +LG+     LA+SLHAPN  IR  I+P
Sbjct: 178 VMRSLRTLNDEFGLSFSPRRITVSTCGIEKGLRELGESGLAFLAVSLHAPNQEIRKRIMP 237

Query: 252 INKKYNIETFLGAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKETPCKIN 311
               ++++  + A+  Y  K+     RVT EY++L  VNDG EHA +L  L+  T  K+N
Sbjct: 238 KAAHWHLDDLITALESYPLKTRE---RVTFEYLLLGGVNDGIEHARELVRLVSRTKGKLN 294

Query: 312 LIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDR 369
           LI +NP  G PY   +  RI  F + L S   T I+RK++G DI AACGQL    + R
Sbjct: 295 LIVYNPAEGDPYDAPTPERILAFEQYLWSKNITAIIRKSKGQDIKAACGQLKASELQR 352