Pairwise Alignments

Query, 347 a.a., Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 296 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score = 61.2 bits (147), Expect = 3e-14
 Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 10/176 (5%)

Query: 80  QVQLVNNFVNQGYDAIIVSAVSPDGLCPALKRAMQRGVKILTWDSDTKPECRSYYINQGT 139
           Q+  V +F+ +G D I++S V   G+  A+ +A + G+K++T D        + +I  GT
Sbjct: 70  QLADVEDFIVKGVDVIVISPVDSQGVRAAIAKAEKAGIKVITVDVPANGATVTSHI--GT 127

Query: 140 PKQLGSMLVEMAAHQVDKEKAKVAF--FYSSPTVTDQNQWVKEAKAKISQEHPGWEIVTT 197
               G +       +V   K KVA   + +  +V ++    KEA AK    HP  EIV T
Sbjct: 128 DNFTGGVKAGELMAEVLGNKGKVAIIDYPTVQSVVNRVNGFKEAIAK----HPEMEIVAT 183

Query: 198 QFGYNDATKSLQTAEGIIKAYPDLDAIIA-PDANALPAAAQAAENLKRNNLAIVGF 252
           Q G   A ++L  A+ +++A PD+  I    D  AL AA         + + ++GF
Sbjct: 184 QTGITRA-EALAAAQNMLQANPDITGIFGFGDDAALAAAVAVKAAGLESQVKVIGF 238