Pairwise Alignments

Query, 347 a.a., Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 333 a.a., sugar ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 59.7 bits (143), Expect = 1e-13
 Identities = 43/182 (23%), Positives = 85/182 (46%), Gaps = 3/182 (1%)

Query: 57  QEAGKALGIDVTYDGPTEPSVSGQVQLVNNFVNQGYDAIIVSAVSPDGLCPALKRAMQRG 116
           ++AG+  G +  Y G  E  V+ Q+   +  + Q    I+V  ++ D     + RA  +G
Sbjct: 49  KQAGQQFGCETEYTGTPEYDVNKQIASFDQALAQNPAGILVHPMNSDPFIEPINRATDQG 108

Query: 117 VKILTWDSDTKPECRSYYINQGTPKQLGSMLVEMAAHQVDKEKAKVAFFYSSPTVTDQNQ 176
             ++T+ +D+    R  YI     ++ G    +  A ++   K + A    +P   + ++
Sbjct: 109 TAVVTFAADSPLSKRVSYITSDNTRE-GIYAADKIAEKLG-GKGEYAVL-ENPGQDNHDK 165

Query: 177 WVKEAKAKISQEHPGWEIVTTQFGYNDATKSLQTAEGIIKAYPDLDAIIAPDANALPAAA 236
            +    A++ ++ P  ++V       D  K+ Q    +I+A P+L A+  P+AN+   AA
Sbjct: 166 RIAAFIARMEEKWPDMKLVGRAASNQDPNKAYQGLTSLIQANPNLGAVFMPEANSAIGAA 225

Query: 237 QA 238
           QA
Sbjct: 226 QA 227