Pairwise Alignments

Query, 347 a.a., Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 338 a.a., autoinducer 2 ABC transporter substrate-binding protein LsrB from Rahnella sp. WP5

 Score =  561 bits (1446), Expect = e-165
 Identities = 275/333 (82%), Positives = 301/333 (90%)

Query: 15  MIALLTAFGLASAAMTVQAAERIAFIPKLVGVGFFTSGGNGAQEAGKALGIDVTYDGPTE 74
           M  LL A  ++ A ++ QAAERIAFIPKLVGVG+FTSGGNGA  AGKALG DVTYDGPTE
Sbjct: 6   MKILLIASAVSLACLSAQAAERIAFIPKLVGVGYFTSGGNGAMAAGKALGADVTYDGPTE 65

Query: 75  PSVSGQVQLVNNFVNQGYDAIIVSAVSPDGLCPALKRAMQRGVKILTWDSDTKPECRSYY 134
           PSVSGQVQ++NNFVNQGY+AI+V+AVSPDGLCPALKRAMQRGVK+LTWDSDTKPECRS Y
Sbjct: 66  PSVSGQVQMINNFVNQGYNAIVVAAVSPDGLCPALKRAMQRGVKVLTWDSDTKPECRSIY 125

Query: 135 INQGTPKQLGSMLVEMAAHQVDKEKAKVAFFYSSPTVTDQNQWVKEAKAKISQEHPGWEI 194
           INQGTP+QLGSMLVEM + QV KEKAKVAFFYSSPTVTDQNQWVKEAKAKI++EHPGWEI
Sbjct: 126 INQGTPQQLGSMLVEMTSSQVKKEKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEI 185

Query: 195 VTTQFGYNDATKSLQTAEGIIKAYPDLDAIIAPDANALPAAAQAAENLKRNNLAIVGFST 254
           VTTQ+GYNDATKSLQTAEGI+K+Y DLDAIIAPDANALPAAAQAAENLKR N+ IVGFST
Sbjct: 186 VTTQYGYNDATKSLQTAEGILKSYGDLDAIIAPDANALPAAAQAAENLKRTNVTIVGFST 245

Query: 255 PNVMRPYVQRGTVKEFGLWDVVQQGKISVYVANALLKNMPMNVGDSLDIPGIGKVTVSPN 314
           PNVMRPYV+RGTVK+FGLWDVV QGKISVYVA+ LLK   +NVGD LD+P +G V V PN
Sbjct: 246 PNVMRPYVERGTVKQFGLWDVVSQGKISVYVADQLLKKGALNVGDKLDVPDVGTVEVVPN 305

Query: 315 SEQGYHYEAKGNGIVLLPERVIFNKDNIDKYDF 347
           S QGY YEAKGNGIVLLPERV+F KDNI KYDF
Sbjct: 306 SVQGYQYEAKGNGIVLLPERVVFTKDNIGKYDF 338