Pairwise Alignments

Query, 347 a.a., Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 317 a.a., periplasmic binding protein/LacI transcriptional regulator from Klebsiella michiganensis M5al

 Score = 63.9 bits (154), Expect = 5e-15
 Identities = 71/273 (26%), Positives = 118/273 (43%), Gaps = 37/273 (13%)

Query: 12  SIKMIALLTAF-GLASAAMTV-QAAERIAFIPKLV---GVGFFTSGGNGAQEAGKALGID 66
           +I + A++T   GLA AA    Q +++IA I  +V      FF++    A++A   +G  
Sbjct: 10  AIAVAAVITTMTGLAPAASAAPQESKKIARIGLMVQDMSNPFFSAMERNAKQAAAKIGAT 69

Query: 67  VTYDGPTEPSVSGQVQLVNNFVNQGYDAIIVSAVSPDGLCPALKRAMQRGVKILTWDSDT 126
           +      +  ++ Q   ++ F+ Q  D II+SAV   G+ PA++RA   G+ ++  D+  
Sbjct: 70  LNVQD-AQVDLANQNTQIDAFIQQKVDLIIISAVDESGIEPAIQRAKAAGIIVIAVDTPA 128

Query: 127 KPECRSYYINQGTPKQLGSMLVEMAAHQVDKEKAKVAFFYSSP--TVTDQNQWVKEAKAK 184
           K    +   N     Q G    E    Q+   K KV     +P  T+ D+ +  K     
Sbjct: 129 KGADAAIMTN---AIQAGETSCEYLFSQMG-GKGKVLLVDGTPIQTIIDRIKGCK----N 180

Query: 185 ISQEHPGWEIVTTQFGYNDATKSLQTAEGIIKAYPDLDAIIA-PDANALPA--------- 234
           ++Q++P  +IV  Q   ND    L     ++ A PD+  I    D +AL A         
Sbjct: 181 VAQKYPDIKIVGQQASRNDRASGLMVTTDMLTANPDVSGIFGMNDPSALGAVLAVEQAGK 240

Query: 235 -----------AAQAAENLKRNNLAIVGFSTPN 256
                      + +A E LKR     +G +T N
Sbjct: 241 AGAINVTGVDGSPEAVEELKRGGSPFIGTATQN 273